RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 MUC4Q99102 2169 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 MRPS12O15235 138 aaKnown RBP6.91□□□□□ -1.3
CCDC170-202ENST00000537358 LYRM1O43325 122 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 RLN2P04090 185 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 SNRPCP09234 159 aaKnown RBP6.91□□□□□ -1.3
CCDC170-202ENST00000537358 BTCP35070 178 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 LEPP41159 167 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 HBG1P69891 147 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 HBG2P69892 147 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 OR5I1Q13606 314 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 NRARPQ7Z6K4 114 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 STX12Q86Y82 276 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 MGST2Q99735 147 aa6.91□□□□□ -1.3
CCDC170-202ENST00000537358 TRAV6A0A075B6T7 132 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 NBDYA0A0U1RRE5 68 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 PLAC8L1A1L4L8 177 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 CCSO14618 274 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 CST7O76096 145 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 TCRBP04435 133 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 S100A11P31949 105 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 S100A10P60903 97 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 BAXQ07812 192 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 ARL16Q0P5N6 197 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 OPCMLQ14982 345 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 C6orf223Q8N319 242 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 RNASE8Q8TDE3 154 aaKnown RBP6.9□□□□□ -1.3
CCDC170-202ENST00000537358 ZNF431Q8TF32 576 aaPredicted RBP6.9□□□□□ -1.3
CCDC170-202ENST00000537358 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 GNPNAT1Q96EK6 184 aaPredicted RBP6.9□□□□□ -1.3
CCDC170-202ENST00000537358 ODF3Q96PU9 254 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 SDHCQ99643 169 aaPredicted RBP6.9□□□□□ -1.3
CCDC170-202ENST00000537358 NDUFA13Q9P0J0 144 aa6.9□□□□□ -1.3
CCDC170-202ENST00000537358 UBE2L5PA0A1B0GUS4 154 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 H3BTX0 84 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 J3KRW8 73 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 ZNF253O75346 499 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 IGLC2P0DOY2 106 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 PRB4P10163 310 aaPredicted RBP6.89□□□□□ -1.31
CCDC170-202ENST00000537358 M6PRP20645 277 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 SULT1A1P50225 295 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 TTC32Q5I0X7 151 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 GFI1BQ5VTD9 330 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 MIC13Q5XKP0 118 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 SSX7Q7RTT5 188 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 ZNRF2Q8NHG8 242 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 C2orf50Q96LR7 162 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 PYGO2Q9BRQ0 406 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 NUDT15Q9NV35 164 aa6.89□□□□□ -1.31
CCDC170-202ENST00000537358 TRAV26-1A0A087WT03 109 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 FAM240BA0A1B0GVZ2 78 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 GAGE12BA1L429 117 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 FAM24AA6NFZ4 105 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 SLC17A3O00476 420 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 MPDU1O75352 247 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 GAGE7O76087 117 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 RPL29P47914 159 aaKnown RBP6.88□□□□□ -1.31
CCDC170-202ENST00000537358 ATP6V1FQ16864 119 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 ZNF680Q8NEM1 530 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 RXFP4Q8TDU9 374 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 MRPL53Q96EL3 112 aaKnown RBP6.88□□□□□ -1.31
CCDC170-202ENST00000537358 SAT2Q96F10 170 aaPredicted RBP6.88□□□□□ -1.31
CCDC170-202ENST00000537358 ZNF503Q96F45 646 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 CCDC32Q9BV29 185 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 AAMDCQ9H7C9 122 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 LYRM2Q9NU23 88 aaPredicted RBP6.88□□□□□ -1.31
CCDC170-202ENST00000537358 SLC39A9Q9NUM3 307 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 PRELID1Q9Y255 219 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 WDR83OSQ9Y284 106 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 LINC00588Q9Y4M8 146 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 TIMM9Q9Y5J7 89 aa6.88□□□□□ -1.31
CCDC170-202ENST00000537358 HERC2O95714 4834 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 PRAC2D3DTV9 90 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 H3BQ15 152 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 PLA2G10O15496 165 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 SLC25A5P05141 298 aaKnown RBP6.87□□□□□ -1.31
CCDC170-202ENST00000537358 FGF7P21781 194 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 PDE6HQ13956 83 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 MORN5Q5VZ52 161 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 ZNF575Q86XF7 245 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 LINC00477Q96M19 166 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 PARD6GQ9BYG4 376 aaPredicted RBP6.87□□□□□ -1.31
CCDC170-202ENST00000537358 Q9H8V8 135 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 GPN1Q9HCN4 374 aaPredicted RBP6.87□□□□□ -1.31
CCDC170-202ENST00000537358 PKHD1P08F94 4074 aa6.87□□□□□ -1.31
CCDC170-202ENST00000537358 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
CCDC170-202ENST00000537358 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
CCDC170-202ENST00000537358 FAT2Q9NYQ8 4349 aa6.86□□□□□ -1.31
CCDC170-202ENST00000537358 TRBV19A0A075B6N1 114 aa6.86□□□□□ -1.31
CCDC170-202ENST00000537358 TRGV2A0A075B6R0 118 aa6.86□□□□□ -1.31
CCDC170-202ENST00000537358 TRAV5A0A0B4J249 113 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms