RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 CYSLTR1Q9Y271 337 aa12.34□□□□□ -0.43
CHFR-213ENST00000536843 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 CRYGCP07315 174 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 KLRD1Q13241 179 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 AMN1Q8IY45 258 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 TMEM75Q8N9X5 138 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 OR10X1Q8NGY0 326 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 C8orf46Q8TAG6 207 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.43
CHFR-213ENST00000536843 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 THBDP07204 575 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 C12orf74Q32Q52 190 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 TMEM30BQ3MIR4 351 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 C20orf78Q9BR46 151 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 TMEM14CQ9P0S9 112 aa12.33□□□□□ -0.44
CHFR-213ENST00000536843 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
CHFR-213ENST00000536843 SCNM1Q9BWG6 230 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 NBEAQ8NFP9 2946 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 RRN3P1Q2M238 152 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 TPPP3Q9BW30 176 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 RNF7Q9UBF6 113 aa12.32□□□□□ -0.44
CHFR-213ENST00000536843 LINC01546A6NGU7 62 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 APOMO95445 188 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 IGHV1-46P01743 117 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 SPINK8P0C7L1 97 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 CRIP1P50238 77 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
CHFR-213ENST00000536843 FOXI1Q12951 378 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
CHFR-213ENST00000536843 ICE1Q9Y2F5 2266 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 MGAQ8IWI9 3026 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 TMEM213A2RRL7 107 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 IGKCP01834 107 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 KLF17Q5JT82 389 aaPredicted RBP12.31□□□□□ -0.44
CHFR-213ENST00000536843 C10orf55Q5SWW7 151 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 EXOC3-AS1Q8N2X6 119 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
CHFR-213ENST00000536843 MAP1BP46821 2468 aaKnown RBP12.3□□□□□ -0.44
CHFR-213ENST00000536843 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 NPYP01303 97 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 CD40P25942 277 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 GATA4P43694 442 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 PVRIGQ6DKI7 326 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 LYZL1Q6UWQ5 148 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 MRPL20Q9BYC9 149 aaKnown RBP12.3□□□□□ -0.44
CHFR-213ENST00000536843 ERG28Q9UKR5 140 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 SPTBN2O15020 2390 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 CCL13Q99616 98 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 ZNRD1Q9P1U0 126 aa12.3□□□□□ -0.44
CHFR-213ENST00000536843 RP1L1Q8IWN7 2480 aaPredicted RBP12.3□□□□□ -0.44
CHFR-213ENST00000536843 WFDC3Q8IUB2 231 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 GAFA1Q96PS6 74 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 HIGD1AQ9Y241 93 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 MSRB2Q9Y3D2 182 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 K7EMI3 77 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 PRRG2O14669 202 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 AKAP13Q12802 2813 aa12.29□□□□□ -0.44
CHFR-213ENST00000536843 DSCAML1Q8TD84 2053 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 CKS2P33552 79 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 SLC25A39Q9BZJ4 359 aaPredicted RBP12.28□□□□□ -0.44
CHFR-213ENST00000536843 DSCAMO60469 2012 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 DPM2O94777 84 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 MT-ATP8P03928 68 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 Q6ZUT4 128 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 GTSCR1Q86UQ5 136 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 FAM216BQ8N7L0 139 aa12.28□□□□□ -0.44
CHFR-213ENST00000536843 A0A1W2PPI3 338 aa12.27□□□□□ -0.44
CHFR-213ENST00000536843 TNFRSF1AP19438 455 aa12.27□□□□□ -0.44
CHFR-213ENST00000536843 FCER1GP30273 86 aa12.27□□□□□ -0.44
CHFR-213ENST00000536843 ZC2HC1BQ5TFG8 222 aa12.27□□□□□ -0.44
CHFR-213ENST00000536843 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.44
CHFR-213ENST00000536843 A0A0G2JNJ9 132 aa12.27□□□□□ -0.45
CHFR-213ENST00000536843 OR4C13Q8NGP0 309 aa12.27□□□□□ -0.45
CHFR-213ENST00000536843 RNF183Q96D59 192 aa12.27□□□□□ -0.45
CHFR-213ENST00000536843 Q9UFV3 132 aa12.27□□□□□ -0.45
CHFR-213ENST00000536843 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 ATP5LO75964 103 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 GATA3P23771 443 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 XGP55808 180 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 TWIST1Q15672 202 aa12.26□□□□□ -0.45
CHFR-213ENST00000536843 DCHS1Q96JQ0 3298 aa12.25□□□□□ -0.45
CHFR-213ENST00000536843 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
CHFR-213ENST00000536843 TRBV19A0A075B6N1 114 aa12.25□□□□□ -0.45
CHFR-213ENST00000536843 LINC01619G3V211 115 aa12.25□□□□□ -0.45
CHFR-213ENST00000536843 IGLV2-23P01705 113 aa12.25□□□□□ -0.45
CHFR-213ENST00000536843 PRSS1P07477 247 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms