RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TCF21O43680 179 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SPINK4O60575 86 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TOMM40O96008 361 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NIT1Q86X76 327 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NHLRC2Q8NBF2 726 aa10.11□□□□□ -0.79
CDK5RAP3-202ENST00000536708 HOXA3O43365 443 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NDUFB8O95169 186 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 APCSP02743 223 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 C3orf79P0CE67 100 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SRIP30626 198 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 UBE2G1P62253 170 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 CT83Q5H943 113 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 Q6ZN92 141 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 Q6ZS46 218 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ARPC1AQ92747 370 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 FMC1Q96HJ9 113 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TXN2Q99757 166 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 PRSS22Q9GZN4 317 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 MRPL27Q9P0M9 148 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ZNF492Q9P255 531 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SETD2Q9BYW2 2564 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 OR2J3O76001 311 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 CA1P00915 261 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 GNG5P63218 68 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 SLC35B1P78383 322 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 C21orf62-AS1Q17RA5 79 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ASPHD1Q5U4P2 390 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 Q6YL49 198 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 STPG4Q8N801 248 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 RASL11BQ9BPW5 248 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 GSX1Q9H4S2 264 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 C1RLQ9NZP8 487 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 HIGD1AQ9Y241 93 aa10.1□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TRBV6-1A0A0K0K1D8 114 aa10.09□□□□□ -0.79
CDK5RAP3-202ENST00000536708 ATP6V0E1O15342 81 aa10.09□□□□□ -0.79
CDK5RAP3-202ENST00000536708 LTAP01374 205 aa10.09□□□□□ -0.79
CDK5RAP3-202ENST00000536708 PSG1P11464 419 aa10.09□□□□□ -0.79
CDK5RAP3-202ENST00000536708 TMUB1Q9BVT8 246 aa10.09□□□□□ -0.79
CDK5RAP3-202ENST00000536708 A0A1B0GXF2 115 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 C19orf71A6NCJ1 209 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 TCRAP04437 139 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 BLCAPP62952 87 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 KLF5Q13887 457 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 TMEM95Q3KNT9 176 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 BLNKQ8WV28 456 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 WNT10AQ9GZT5 417 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 Q9H3A6 140 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 LINC00527Q9UJ94 153 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 SLAQ13239 276 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 ECSCRQ19T08 205 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 SLC25A39Q9BZJ4 359 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
CDK5RAP3-202ENST00000536708 NIPBLQ6KC79 2804 aaeCLIP10.08□□□□□ -0.83e-6■■■■□ 20.4
CDK5RAP3-202ENST00000536708 IGHV3-21A0A0B4J1V1 117 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 K7EIM0 57 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 IGKV1-17P01599 117 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 GDF5OSQ5U4N7 250 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 GFRA4Q9GZZ7 299 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 RNF24Q9Y225 148 aa10.07□□□□□ -0.8
CDK5RAP3-202ENST00000536708 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 HIGD1CA8MV81 97 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 NPIPB6E9PJ23 425 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 G3V318 75 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 BORCS7Q96B45 105 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 RPP21Q9H633 154 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 A8MWL6 223 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 INAFM1C9JVW0 142 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 NTF3P20783 257 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 LYZP61626 148 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 FAM19A2Q8N3H0 131 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 ESM1Q9NQ30 184 aa10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-202ENST00000536708 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 PCP4P48539 62 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 PMCHL1Q16048 86 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 PRR27Q6MZM9 219 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 C16orf54Q6UWD8 224 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 LINC00322Q6ZN03 302 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 C20orf202A1L168 122 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 H3BRN7 92 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 TSPOP30536 169 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 LEMD1Q68G75 181 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 LYPD1Q8N2G4 141 aa10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 ALKBH7Q9BT30 221 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-202ENST00000536708 SRD5A1P18405 259 aa10.04□□□□□ -0.8
CDK5RAP3-202ENST00000536708 UNQ5815/PRO19632Q6UWF5 114 aa10.04□□□□□ -0.8
CDK5RAP3-202ENST00000536708 ATOH7Q8N100 152 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms