RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 IGHG2P01859 326 aa6.23□□□□□ -1.41
COL21A1-212ENST00000535941 TRBV6-1A0A0K0K1D8 114 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 G3V4G9 280 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 CD24P25063 80 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
COL21A1-212ENST00000535941 OR1L4Q8NGR5 311 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 C7orf69Q9H7B7 122 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 ZNF462Q96JM2 2506 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 TRAV40A0A0B4J280 105 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 A0A1W2PS18 150 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 HSBP1O75506 76 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 IGLV1-40P01703 118 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 IGLL1P15814 213 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 GATA2P23769 480 aaPredicted RBP6.22□□□□□ -1.41
COL21A1-212ENST00000535941 ATP5G3P48201 142 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 Q8N2B8 174 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 C5orf17Q8NAS9 161 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 OR4F17Q8NGA8 305 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 MYOZ3Q8TDC0 251 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 DERL1Q9BUN8 251 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
COL21A1-212ENST00000535941 TRAV8-6A0A0B4J262 113 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 GGTLC3B5MD39 225 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 SLC17A3O00476 420 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 ATP6V0E1O15342 81 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 IGLV2-8P01709 118 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 DEFB125Q8N687 156 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 ZNF491Q8N8L2 437 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 RCHY1Q96PM5 261 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 TNFRSF19Q9NS68 423 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.41
COL21A1-212ENST00000535941 SRIP30626 198 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 PET117Q6UWS5 81 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 CCDC140Q96MF4 163 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
COL21A1-212ENST00000535941 KLF12Q9Y4X4 402 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 U3KQE9 123 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 LINC01548A6NM66 108 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 J3QKU1 62 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 BVES-AS1Q5T3Y7 98 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 SIGMAR1Q99720 223 aa6.21□□□□□ -1.42
COL21A1-212ENST00000535941 SOX21Q9Y651 276 aaPredicted RBP6.21□□□□□ -1.42
COL21A1-212ENST00000535941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.21□□□□□ -1.42
COL21A1-212ENST00000535941 C7orf71A4D174 169 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 CTSGP08311 255 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 OR10J4P0C629 311 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 ARL3P36405 182 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 SLC35B1P78383 322 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 RPEL1Q2QD12 228 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 SLC25A34Q6PIV7 304 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 ZNF329Q86UD4 541 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 RNF152Q8N8N0 203 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 SHANK2-AS3Q9BTD1 123 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 CLPSL1A2RUU4 121 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 M0R2Z0 102 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 Q6YL49 198 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 SCGB2A1O75556 95 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 C10orf113Q5VZT2 155 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 COX8CQ7Z4L0 72 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
COL21A1-212ENST00000535941 FOXC2Q99958 501 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 GEMIN7Q9H840 131 aaKnown RBP6.2□□□□□ -1.42
COL21A1-212ENST00000535941 ZNF355PQ9NSJ1 428 aa6.2□□□□□ -1.42
COL21A1-212ENST00000535941 A0A087X0K7 114 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 TRAV5A0A0B4J249 113 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 A0A1W2PPV4 95 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 TMEM89A2RUT3 159 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 FAM223BA6NKX1 122 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 CD5LO43866 347 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 MT-ND6P03923 174 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
COL21A1-212ENST00000535941 TAS2R45P59539 299 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 UBE2G1P62253 170 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 TIGITQ495A1 244 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 FAM223AQ8IWN6 122 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 K7EN84 100 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 COL8A1P27658 744 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 LINC00305Q7Z4B0 112 aa6.19□□□□□ -1.42
COL21A1-212ENST00000535941 SLC25A39Q9BZJ4 359 aaPredicted RBP6.19□□□□□ -1.42
COL21A1-212ENST00000535941 TRAV9-1A0A075B6T8 112 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 SCO2A0A1W2PP80 73 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 A1L4Q6 167 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 FRMD6-AS1P0C7T7 363 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 TCL1AP56279 114 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
COL21A1-212ENST00000535941 BRD3OSQ6XYD6 125 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 TSKUQ8WUA8 353 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 RASL11BQ9BPW5 248 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 SPTA1P02549 2419 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 FAM231BA6NCW3 169 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 ACTL6BO94805 426 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 IGLV2-11P01706 119 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
COL21A1-212ENST00000535941 MRPL54Q6P161 138 aaKnown RBP6.18□□□□□ -1.42
COL21A1-212ENST00000535941 OCC1Q8TAD7 63 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms