RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 H3BQ15 152 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 EIF3GO75821 320 aaKnown RBP eCLIP8.13□□□□□ -1.11
UBE3B-205ENST00000535900 S100A9P06702 114 aaKnown RBP8.13□□□□□ -1.11
UBE3B-205ENST00000535900 RHEBQ15382 184 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 TCF24Q7RTU0 167 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 AAMDCQ9H7C9 122 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 OTORQ9NRC9 128 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 ZNF586Q9NXT0 402 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 MLXQ9UH92 298 aa8.13□□□□□ -1.11
UBE3B-205ENST00000535900 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 IGHV3-49A0A0A0MS15 119 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 ZNF727A8MUV8 499 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 GGTLC3B5MD39 225 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 C9JCJ5 164 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 ISLRO14498 428 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 TSPAN4O14817 238 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 ID1P41134 155 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 ATP5G3P48201 142 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 UBE2G2P60604 165 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 DEFB114Q30KQ6 69 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 RBPMS2Q6ZRY4 209 aaKnown RBP8.12□□□□□ -1.11
UBE3B-205ENST00000535900 C5orf17Q8NAS9 161 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 MRPL53Q96EL3 112 aaKnown RBP8.12□□□□□ -1.11
UBE3B-205ENST00000535900 TVP23CQ96ET8 276 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 SMIM7Q9BQ49 75 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 ZNF331Q9NQX6 463 aaPredicted RBP8.12□□□□□ -1.11
UBE3B-205ENST00000535900 NAT8Q9UHE5 227 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 SMAD5-AS1Q9Y6J3 95 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
UBE3B-205ENST00000535900 IGHV3-66A0A0C4DH42 116 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
UBE3B-205ENST00000535900 NDUFB4O95168 129 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 CMC4P56277 68 aaPredicted RBP8.11□□□□□ -1.11
UBE3B-205ENST00000535900 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
UBE3B-205ENST00000535900 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
UBE3B-205ENST00000535900 GUCA2BQ16661 112 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 TMEM241Q24JQ0 296 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 ADAMTSL5Q6ZMM2 481 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 BLNKQ8WV28 456 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 SMIM12Q96EX1 92 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 PRR25Q96S07 402 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 SPAG8Q99932 426 aaPredicted RBP8.11□□□□□ -1.11
UBE3B-205ENST00000535900 PARLQ9H300 379 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 Q9H3A6 140 aa8.11□□□□□ -1.11
UBE3B-205ENST00000535900 A0A087WWC5 75 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 DNASE2O00115 360 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-205ENST00000535900 SAP30O75446 220 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 IGLV1-51P01701 117 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 CSN1S1P47710 185 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 TAS2R60P59551 318 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
UBE3B-205ENST00000535900 RANP62826 216 aaKnown RBP8.1□□□□□ -1.11
UBE3B-205ENST00000535900 LCN12Q6JVE5 192 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 CMTM2Q8TAZ6 248 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 C2CD4CQ8TF44 421 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 C16orf92Q96LL3 132 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 MS4A6AQ9H2W1 248 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 SDF2L1Q9HCN8 221 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 EPDR1Q9UM22 224 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 KLF12Q9Y4X4 402 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 SORL1Q92673 2214 aa8.1□□□□□ -1.11
UBE3B-205ENST00000535900 TRBV6-1A0A0K0K1D8 114 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 PGPA6NDG6 321 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 OR4C46A6NHA9 309 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 K7EQM0 130 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 SOCS3O14543 225 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 DCANP1Q8TF63 244 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 C17orf77Q96MU5 243 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 FAM110AQ9BQ89 295 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 TUBA4BQ9H853 241 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 TMEM242Q9NWH2 141 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 U3KQK5 164 aa8.09□□□□□ -1.11
UBE3B-205ENST00000535900 RYR3Q15413 4870 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 SCO2A0A1W2PP80 73 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 K7EQG2 157 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 PEX7O00628 323 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
UBE3B-205ENST00000535900 NHLRC4P0CG21 123 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-205ENST00000535900 CNN1P51911 297 aaKnown RBP8.08□□□□□ -1.12
UBE3B-205ENST00000535900 CEBPGP53567 150 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 PSG3Q16557 428 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 CD300EQ496F6 205 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-205ENST00000535900 TMEM61Q8N0U2 210 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
UBE3B-205ENST00000535900 ZNF256Q9Y2P7 627 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-205ENST00000535900 C7orf77A4D0Y5 90 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 RBAKDNA6NC62 111 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 CXorf65A6NEN9 183 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 M0R036 132 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 SLC17A3O00476 420 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 TCRAP04437 139 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 EDN2P20800 178 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 AKR1C3P42330 323 aa8.07□□□□□ -1.12
UBE3B-205ENST00000535900 RPL35P42766 123 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms