RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 RPL30P62888 115 aaKnown RBP2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 CLLU1OSQ5K130 101 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 C11orf71Q6IPW1 123 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 EBLN2Q6P2I7 272 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 FP248Q71RG6 208 aaPredicted RBP2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 LRRC29Q8WV35 223 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 VSIG2Q96IQ7 327 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 ABHD14BQ96IU4 210 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 SPACA5Q96QH8 159 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 PARP12Q9H0J9 701 aaKnown RBP2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF71Q9NQZ8 489 aaPredicted RBP2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 SLC25A15Q9Y619 301 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 LOXHD1Q8IVV2 1947 aa2.4□□□□□ -2.03
SPARCL1-208ENST00000535835 SPHKAPQ2M3C7 1700 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ATG2AQ2TAZ0 1938 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ADAMTS9Q9P2N4 1935 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 IGLV1-36A0A0B4J1U3 117 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 A0A1W2PNU3 283 aaPredicted RBP2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 hADV29S1A0JD25 119 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 A8MUN3 132 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 IBA57-AS1B1ANH7 110 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 FSTL3O95633 263 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 NPYP01303 97 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 IGLV3-27P01718 113 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 PEBP1P30086 187 aaKnown RBP2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 FCGR2CP31995 323 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 SYNJ2BPP57105 145 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 UBE2D3P61077 147 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 PCBD1P61457 104 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 UBE2D2P62837 147 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 CACNG7P62955 275 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 RSPO1Q2MKA7 263 aaPredicted RBP2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 NSUN5P1Q3KNT7 163 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ASB16-AS1Q495Z4 193 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ADAMTSL4-AS1Q5T5F5 129 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 LINC00242Q5T6M2 205 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 Q6ZQT7 251 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 C6orf201Q7Z4U5 140 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 TMEM75Q8N9X5 138 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 WFDC11Q8NEX6 87 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 RFESDQ8TAC1 157 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 PRAC1Q96KF2 57 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 DSCR8Q96T75 97 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 DYNLRB1Q9NP97 96 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 NXT2Q9NPJ8 142 aaKnown RBP2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF492Q9P255 531 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 HHLA3Q9XRX5 114 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 KLK5Q9Y337 293 aaPredicted RBP2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 LINC00588Q9Y4M8 146 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ARL2-SNX15V9GYD0 113 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ZSWIM8A7E2V4 1837 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF646O15015 1829 aaPredicted RBP2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 ECM29Q5VYK3 1845 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 LRP5O75197 1615 aa2.39□□□□□ -2.03
SPARCL1-208ENST00000535835 STRCQ7RTU9 1775 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 PIK3C2AO00443 1686 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 XIRP1Q702N8 1843 aaKnown RBP2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 A0A0J9YWU9 116 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 MYMXA0A1B0GTQ4 84 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 LOC389332A0A1B0GUA5 103 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 INS-IGF2F8WCM5 200 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ADGRB1O14514 1584 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF73O43830 326 aaPredicted RBP2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 CDK2AP2O75956 126 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 NXPH4O95158 308 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF80P51504 273 aaPredicted RBP2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 DSCR4P56555 118 aaPredicted RBP2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 SNRPD3P62318 126 aaKnown RBP2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 CCL20P78556 96 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 SERF2P84101 59 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 COL24A1Q17RW2 1714 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ORMDL2Q53FV1 153 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 FAM104BQ5XKR9 115 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 NCBP2-AS2Q69YL0 99 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ATP11AUNQ6ZP68 121 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 MARCH3Q86UD3 253 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 PDPNQ86YL7 162 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF584Q8IVC4 421 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 XRN1Q8IZH2 1706 aaKnown RBP2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 TMEM252Q8N6L7 170 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 C11orf72Q8NBR9 251 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 C10orf105Q8TEF2 133 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 DIRC1Q969H9 104 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 IFI27L1Q96BM0 104 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 RNF185Q96GF1 192 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 ZC2HC1AQ96GY0 325 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 HIST1H4GQ99525 98 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 SMIM7Q9BQ49 75 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 TANC1Q9C0D5 1861 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 CXCL16Q9H2A7 254 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 PCNX3Q9H6A9 2034 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 DEPPQ9NTK1 212 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 IL36BQ9NZH7 164 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 CRYBG1Q9Y4K1 1723 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 SELENOKQ9Y6D0 94 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 SCN9AQ15858 1988 aa2.38□□□□□ -2.03
SPARCL1-208ENST00000535835 CHD3Q12873 2000 aaKnown RBP2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 IGLV7-46A0A075B6I9 117 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 IGHV3OR15-7A0A075B7D8 119 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms