RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 OR10J6PQ8NGY7 276 aa16.09■□□□□ 0.17
VPS37C-202ENST00000535818 AAMDCQ9H7C9 122 aa16.09■□□□□ 0.17
VPS37C-202ENST00000535818 PRELID1Q9Y255 219 aa16.09■□□□□ 0.17
VPS37C-202ENST00000535818 RFNGQ9Y644 331 aa16.09■□□□□ 0.17
VPS37C-202ENST00000535818 SMLR1H3BR10 107 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 BOLA2-SMG1P6H3BVE0 249 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 M0R2Z0 102 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 RPL7L1Q6DKI1 246 aaKnown RBP16.08■□□□□ 0.16
VPS37C-202ENST00000535818 OR10G4Q8NGN3 311 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 OR10G9Q8NGN4 311 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 OR10G7Q8NGN6 311 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 C11orf45Q8TAV5 145 aa16.08■□□□□ 0.16
VPS37C-202ENST00000535818 MRPL53Q96EL3 112 aaKnown RBP16.08■□□□□ 0.16
VPS37C-202ENST00000535818 OR10J4P0C629 311 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 RBMY1A1P0DJD3 496 aaKnown RBP16.07■□□□□ 0.16
VPS37C-202ENST00000535818 RBMY1CP0DJD4 496 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 RBMY1FQ15415 496 aaKnown RBP16.07■□□□□ 0.16
VPS37C-202ENST00000535818 ZNF705AQ6ZN79 300 aaPredicted RBP16.07■□□□□ 0.16
VPS37C-202ENST00000535818 PQLC2Q6ZP29 291 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 TCTE3Q8IZS6 198 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 KCNRGQ8N5I3 272 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 IGF2BP2-AS1Q96M15 143 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 ARPC5LQ9BPX5 153 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 TMEM208Q9BTX3 173 aa16.07■□□□□ 0.16
VPS37C-202ENST00000535818 PRAC2D3DTV9 90 aa16.06■□□□□ 0.16
VPS37C-202ENST00000535818 INSP01308 110 aa16.06■□□□□ 0.16
VPS37C-202ENST00000535818 NBEAP1P0C6P0 100 aa16.06■□□□□ 0.16
VPS37C-202ENST00000535818 EIF5AP63241 154 aaKnown RBP16.06■□□□□ 0.16
VPS37C-202ENST00000535818 RNF141Q8WVD5 230 aa16.06■□□□□ 0.16
VPS37C-202ENST00000535818 KANTRA0A1W2PQU2 76 aa16.05■□□□□ 0.16
VPS37C-202ENST00000535818 NDUFB4O95168 129 aa16.05■□□□□ 0.16
VPS37C-202ENST00000535818 CDC34P49427 236 aaPredicted RBP16.05■□□□□ 0.16
VPS37C-202ENST00000535818 RAB2AP61019 212 aa16.05■□□□□ 0.16
VPS37C-202ENST00000535818 UBE2L3P68036 154 aaKnown RBP16.05■□□□□ 0.16
VPS37C-202ENST00000535818 FAM122CQ6P4D5 195 aa16.05■□□□□ 0.16
VPS37C-202ENST00000535818 NEU1Q99519 415 aa16.05■□□□□ 0.16
VPS37C-202ENST00000535818 NUPR2A6NF83 97 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 SMIM9A6NGZ8 99 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 M0R3E3 92 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 NANOS2P60321 138 aaKnown RBP16.04■□□□□ 0.16
VPS37C-202ENST00000535818 AKAP14Q86UN6 197 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 BAP18Q8IXM2 172 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 C1orf158Q8N1D5 194 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 EXOC3-AS1Q8N2X6 119 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 FXYD5Q96DB9 178 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 ST6GAL2Q96JF0 529 aa16.04■□□□□ 0.16
VPS37C-202ENST00000535818 TRAV12-2A0A075B6T6 113 aa16.03■□□□□ 0.16
VPS37C-202ENST00000535818 HBE1P02100 147 aa16.03■□□□□ 0.16
VPS37C-202ENST00000535818 ICAM4Q14773 271 aa16.03■□□□□ 0.16
VPS37C-202ENST00000535818 AKR1C8PQ5T2L2 129 aa16.03■□□□□ 0.16
VPS37C-202ENST00000535818 LYPD1Q8N2G4 141 aa16.03■□□□□ 0.16
VPS37C-202ENST00000535818 ACTR3CQ9C0K3 210 aaPredicted RBP16.03■□□□□ 0.16
VPS37C-202ENST00000535818 CRXO43186 299 aaPredicted RBP16.02■□□□□ 0.16
VPS37C-202ENST00000535818 PFDN1O60925 122 aa16.02■□□□□ 0.16
VPS37C-202ENST00000535818 EIF3GO75821 320 aaKnown RBP eCLIP16.02■□□□□ 0.16
VPS37C-202ENST00000535818 CDKN1BP46527 198 aa16.02■□□□□ 0.16
VPS37C-202ENST00000535818 OR11H4Q8NGC9 324 aa16.02■□□□□ 0.16
VPS37C-202ENST00000535818 ZNF503Q96F45 646 aa16.02■□□□□ 0.16
VPS37C-202ENST00000535818 PHYHIPLQ96FC7 376 aa16.02■□□□□ 0.16
VPS37C-202ENST00000535818 hCG_2014768A0A024R1R8 64 aa16.01■□□□□ 0.15
VPS37C-202ENST00000535818 BCL2L11O43521 198 aa16.01■□□□□ 0.15
VPS37C-202ENST00000535818 TSPOP30536 169 aa16.01■□□□□ 0.15
VPS37C-202ENST00000535818 FAM74A1Q5RGS3 127 aa16.01■□□□□ 0.15
VPS37C-202ENST00000535818 PHLDA1Q8WV24 401 aaPredicted RBP16.01■□□□□ 0.15
VPS37C-202ENST00000535818 SH3BGRL3Q9H299 93 aa16.01■□□□□ 0.15
VPS37C-202ENST00000535818 TMEM189A5PLL7 270 aa16■□□□□ 0.15
VPS37C-202ENST00000535818 CSN1S1P47710 185 aa16■□□□□ 0.15
VPS37C-202ENST00000535818 EMP1P54849 157 aa16■□□□□ 0.15
VPS37C-202ENST00000535818 RRN3P1Q2M238 152 aa16■□□□□ 0.15
VPS37C-202ENST00000535818 CEMP1Q6PRD7 247 aaPredicted RBP16■□□□□ 0.15
VPS37C-202ENST00000535818 RPP25LQ8N5L8 163 aaKnown RBP16■□□□□ 0.15
VPS37C-202ENST00000535818 KLK5Q9Y337 293 aaPredicted RBP16■□□□□ 0.15
VPS37C-202ENST00000535818 STARD9Q9P2P6 4700 aa15.99■□□□□ 0.15
VPS37C-202ENST00000535818 NPIPB6E9PJ23 425 aa15.99■□□□□ 0.15
VPS37C-202ENST00000535818 C1QBP02746 253 aa15.99■□□□□ 0.15
VPS37C-202ENST00000535818 RANP62826 216 aaKnown RBP15.99■□□□□ 0.15
VPS37C-202ENST00000535818 HYLS1Q96M11 299 aa15.99■□□□□ 0.15
VPS37C-202ENST00000535818 ZNF471Q9BX82 626 aaPredicted RBP15.99■□□□□ 0.15
VPS37C-202ENST00000535818 CYTL1Q9NRR1 136 aa15.99■□□□□ 0.15
VPS37C-202ENST00000535818 LOC102723971A0A1B0GUV8 181 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 HMGB3O15347 200 aaKnown RBP15.98■□□□□ 0.15
VPS37C-202ENST00000535818 STAG3L2P0CL84 134 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 STAG3L3P0CL85 134 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 LEPP41159 167 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 RAB24Q969Q5 203 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 Q9H3A6 140 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 CELA1Q9UNI1 258 aa15.98■□□□□ 0.15
VPS37C-202ENST00000535818 J3KRW8 73 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 CXorf1O96002 111 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 CT45A10P0DMU9 189 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 ERCC8Q13216 396 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 TMUB2Q71RG4 321 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 TMEM256Q8N2U0 113 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 ODF3Q96PU9 254 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 LINC01587Q99440 93 aa15.97■□□□□ 0.15
VPS37C-202ENST00000535818 IGKV2-40A0A087WW87 121 aaPredicted RBP15.96■□□□□ 0.15
VPS37C-202ENST00000535818 CTXND1A0A1B0GTU2 59 aa15.96■□□□□ 0.15
VPS37C-202ENST00000535818 IGKV2D-40P01614 121 aaPredicted RBP15.96■□□□□ 0.15
VPS37C-202ENST00000535818 SEC11BP0C7V7 166 aa15.96■□□□□ 0.15
VPS37C-202ENST00000535818 ARL14EPLP0DKL9 152 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms