RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 DYNLRB1Q9NP97 96 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 Q9UFV3 132 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 FBLL1A6NHQ2 334 aaKnown RBP10.54□□□□□ -0.72
HDAC4-214ENST00000535493 K7EIM0 57 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 CRYGBP07316 175 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 TWIST1Q15672 202 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 LINC00311Q8N616 119 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 ZNF491Q8N8L2 437 aa10.54□□□□□ -0.72
HDAC4-214ENST00000535493 A0A0G2JLM5 398 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 C16orf97H3BN30 126 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-214ENST00000535493 RNF125Q96EQ8 232 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 ZNF414Q96IQ9 312 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 SCNM1Q9BWG6 230 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 HRNRQ86YZ3 2850 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-214ENST00000535493 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 ZNF207O43670 478 aaKnown RBP10.53□□□□□ -0.72
HDAC4-214ENST00000535493 SH2D1AO60880 128 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 LY6HO94772 140 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 GOSR1O95249 250 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 EVI2AP22794 236 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 APOBEC3AP31941 199 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-214ENST00000535493 CKS2P33552 79 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 RNASE6Q93091 150 aaKnown RBP10.53□□□□□ -0.72
HDAC4-214ENST00000535493 RPEQ96AT9 228 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 CUBNO60494 3623 aa10.53□□□□□ -0.72
HDAC4-214ENST00000535493 A1L4Q6 167 aa10.52□□□□□ -0.72
HDAC4-214ENST00000535493 BUB1B-PAK6H3BSN5 160 aa10.52□□□□□ -0.72
HDAC4-214ENST00000535493 K7ERJ3 54 aa10.52□□□□□ -0.72
HDAC4-214ENST00000535493 TNFRSF13BO14836 293 aaPredicted RBP10.52□□□□□ -0.72
HDAC4-214ENST00000535493 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.72
HDAC4-214ENST00000535493 ZNF80P51504 273 aaPredicted RBP10.52□□□□□ -0.72
HDAC4-214ENST00000535493 FAM104BQ5XKR9 115 aa10.52□□□□□ -0.72
HDAC4-214ENST00000535493 NUP37Q8NFH4 326 aa10.52□□□□□ -0.72
HDAC4-214ENST00000535493 IGKV2D-26A0A0A0MRZ7 120 aa10.52□□□□□ -0.73
HDAC4-214ENST00000535493 C9orf118A6NHY6 69 aa10.52□□□□□ -0.73
HDAC4-214ENST00000535493 RBPJQ06330 500 aa10.52□□□□□ -0.73
HDAC4-214ENST00000535493 ORMDL3Q8N138 153 aa10.52□□□□□ -0.73
HDAC4-214ENST00000535493 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.73
HDAC4-214ENST00000535493 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-214ENST00000535493 SEC11AP67812 179 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 UFSP1Q6NVU6 142 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 BOD1L2Q8IYS8 172 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 IFI27L1Q96BM0 104 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 ATRXP46100 2492 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 K7EQM0 130 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 TIMM23O14925 209 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 SMAD7O15105 426 aaKnown RBP10.51□□□□□ -0.73
HDAC4-214ENST00000535493 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 VGLL1Q99990 258 aa10.51□□□□□ -0.73
HDAC4-214ENST00000535493 H3BRN7 92 aa10.5□□□□□ -0.73
HDAC4-214ENST00000535493 GCSHP23434 173 aa10.5□□□□□ -0.73
HDAC4-214ENST00000535493 ADAMTSL5Q6ZMM2 481 aa10.5□□□□□ -0.73
HDAC4-214ENST00000535493 NDUFS7O75251 213 aa10.5□□□□□ -0.73
HDAC4-214ENST00000535493 SPTAN1Q13813 2472 aaKnown RBP10.5□□□□□ -0.73
HDAC4-214ENST00000535493 A6NDN8 102 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 HBDP02042 147 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 HES1Q14469 280 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 ONECUT1Q9UBC0 465 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 E7EQL1 145 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
HDAC4-214ENST00000535493 GNG7O60262 68 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 GTF2H5Q6ZYL4 71 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 SPCS1Q9Y6A9 102 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 IGHV3OR16-13A0A075B7E8 117 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 IGHV3-74A0A0B4J1X5 117 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 H3BRM9 83 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 ORM1P02763 201 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 FXYD2P54710 66 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 GFRALQ6UXV0 394 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 ABHD17AQ96GS6 310 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 AGRNO00468 2067 aa10.49□□□□□ -0.73
HDAC4-214ENST00000535493 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
HDAC4-214ENST00000535493 KLRD1Q13241 179 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 C3orf36Q3SXR2 165 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 AAMDCQ9H7C9 122 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 RALYQ9UKM9 306 aaKnown RBP10.48□□□□□ -0.73
HDAC4-214ENST00000535493 PPIAL4CA0A0B4J2A2 164 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 K7EP34 96 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 PPIAL4GP0DN37 164 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 RPS20P60866 119 aaKnown RBP10.48□□□□□ -0.73
HDAC4-214ENST00000535493 ERCC8Q13216 396 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 ZNF493Q6ZR52 646 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
HDAC4-214ENST00000535493 PRSS1P07477 247 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 Q6ZS92 163 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 MTURNQ8N3F0 131 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 FAM57AQ8TBR7 257 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 WI2-2373I1.2A0A1W2PRP0 233 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
HDAC4-214ENST00000535493 LEPP41159 167 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms