RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RTL8CO15255 209 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 PRAF2O60831 178 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 IGLC2P0DOY2 106 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 S100A11P31949 105 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 SULT1A1P50225 295 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 HBG1P69891 147 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 HBG2P69892 147 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 IL15RAQ13261 267 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 FCN2Q15485 313 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 GUK1Q16774 197 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 ZNF493Q6ZR52 646 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 LYRM2Q9NU23 88 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 TIMM8BQ9Y5J9 83 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 ALG5Q9Y673 324 aa11.42□□□□□ -0.58
CLSTN3-204ENST00000535313 UBE2L5PA0A1B0GUS4 154 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 ATP5G1P05496 136 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 ATP5G3P48201 142 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 BAXQ07812 192 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 VWC2Q2TAL6 325 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 SOHLH1Q5JUK2 328 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 C20orf144Q9BQM9 153 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 ATG101Q9BSB4 218 aa11.41□□□□□ -0.58
CLSTN3-204ENST00000535313 TRAV5A0A0B4J249 113 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 CBY3A6NI87 242 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 PRAC2D3DTV9 90 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 H3BQ15 152 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 SIX6O95475 246 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 RPL29P47914 159 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 FAM3BP58499 235 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 RAB32Q13637 225 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 Q6ZR54 194 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 SAT2Q96F10 170 aaPredicted RBP11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 SLC39A9Q9NUM3 307 aa11.4□□□□□ -0.58
CLSTN3-204ENST00000535313 A0A1B0GVY2 172 aa11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 ATP6V1FQ16864 119 aa11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 RGS21Q2M5E4 152 aa11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 CCDC28AQ8IWP9 274 aa11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 RNASE8Q8TDE3 154 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 NOP10Q9NPE3 64 aaKnown RBP11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 KIAA1109Q2LD37 5005 aa11.39□□□□□ -0.59
CLSTN3-204ENST00000535313 PKHD1P08F94 4074 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 NUDT3O95989 172 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 FGF7P21781 194 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 LEPP41159 167 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 H2BFSP57053 126 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 GFI1BQ5VTD9 330 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 CHAC2Q8WUX2 184 aa11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 GPN1Q9HCN4 374 aaPredicted RBP11.38□□□□□ -0.59
CLSTN3-204ENST00000535313 ZNF253O75346 499 aa11.37□□□□□ -0.59
CLSTN3-204ENST00000535313 MPDU1O75352 247 aa11.37□□□□□ -0.59
CLSTN3-204ENST00000535313 ODF3Q96PU9 254 aa11.37□□□□□ -0.59
CLSTN3-204ENST00000535313 ZNF586Q9NXT0 402 aa11.37□□□□□ -0.59
CLSTN3-204ENST00000535313 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
CLSTN3-204ENST00000535313 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
CLSTN3-204ENST00000535313 J3KRW8 73 aa11.36□□□□□ -0.59
CLSTN3-204ENST00000535313 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
CLSTN3-204ENST00000535313 C1orf134Q5TEV5 83 aa11.36□□□□□ -0.59
CLSTN3-204ENST00000535313 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
CLSTN3-204ENST00000535313 TRBV19A0A075B6N1 114 aa11.35□□□□□ -0.59
CLSTN3-204ENST00000535313 RLN2P04090 185 aa11.35□□□□□ -0.59
CLSTN3-204ENST00000535313 CCL18P55774 89 aa11.35□□□□□ -0.59
CLSTN3-204ENST00000535313 MRPL53Q96EL3 112 aaKnown RBP11.35□□□□□ -0.59
CLSTN3-204ENST00000535313 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
CLSTN3-204ENST00000535313 TIMM9Q9Y5J7 89 aa11.35□□□□□ -0.59
CLSTN3-204ENST00000535313 DNAH11Q96DT5 4516 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 TRAV12-3A0A0B4J271 114 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 SNURFLB1AK76 121 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 HIST1H1EP10412 219 aaKnown RBP11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 PDE6HQ13956 83 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 CLINT1Q14677 625 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 RNF141Q8WVD5 230 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 SLC25A31Q9H0C2 315 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 PKD1P98161 4303 aa11.34□□□□□ -0.59
CLSTN3-204ENST00000535313 H0YIZ8 118 aa11.33□□□□□ -0.6
CLSTN3-204ENST00000535313 M0R3E3 92 aa11.33□□□□□ -0.6
CLSTN3-204ENST00000535313 OR5I1Q13606 314 aa11.33□□□□□ -0.6
CLSTN3-204ENST00000535313 BLNKQ8WV28 456 aa11.33□□□□□ -0.6
CLSTN3-204ENST00000535313 PYGO2Q9BRQ0 406 aa11.33□□□□□ -0.6
CLSTN3-204ENST00000535313 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 E5RGE8 158 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 SSNA1O43805 119 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 GAGE7O76087 117 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 MED14OSP0DP75 135 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 PYYP10082 97 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 NHLH2Q02577 135 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 ERCC8Q13216 396 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
CLSTN3-204ENST00000535313 OR5C1Q8NGR4 320 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms