RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SPINK8P0C7L1 97 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 UBE2WQ96B02 151 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 RHPN1-AS1Q9BWJ2 59 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 A0A0J9YY99 117 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 ADAMTSL5Q6ZMM2 481 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 GLRX5Q86SX6 157 aa10.24□□□□□ -0.77
SPG11-203ENST00000535302 A0A1B0GWJ7 208 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 WISP1O95388 367 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 C5orf64Q2M2E5 130 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 TMEM213A2RRL7 107 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 AGMATQ9BSE5 352 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 RSPO3Q9BXY4 272 aaPredicted RBP10.23□□□□□ -0.77
SPG11-203ENST00000535302 CYTL1Q9NRR1 136 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 HEATR5AQ86XA9 2040 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 IGF2BP2-AS1Q96M15 143 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 AMBPP02760 352 aa10.23□□□□□ -0.77
SPG11-203ENST00000535302 VCYO14598 125 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 TAL2Q16559 108 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 IGKV1-39P01597 117 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 IGKV1D-39P04432 117 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 SCRT2Q9NQ03 307 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 FBLN5Q9UBX5 448 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 SIGLEC9Q9Y336 463 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 AZU1P20160 251 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 DSCR9P59020 149 aa10.22□□□□□ -0.77
SPG11-203ENST00000535302 TRAV9-1A0A075B6T8 112 aa10.21□□□□□ -0.77
SPG11-203ENST00000535302 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.77
SPG11-203ENST00000535302 SPRY2O43597 315 aa10.21□□□□□ -0.77
SPG11-203ENST00000535302 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.77
SPG11-203ENST00000535302 RPP25LQ8N5L8 163 aaKnown RBP10.21□□□□□ -0.77
SPG11-203ENST00000535302 TMEM242Q9NWH2 141 aa10.21□□□□□ -0.77
SPG11-203ENST00000535302 TRBV7-1A0A0A6YYK4 115 aa10.21□□□□□ -0.78
SPG11-203ENST00000535302 NDUFAF3Q9BU61 184 aa10.21□□□□□ -0.78
SPG11-203ENST00000535302 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.78
SPG11-203ENST00000535302 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.78
SPG11-203ENST00000535302 LINC01356Q8N9X3 169 aa10.21□□□□□ -0.78
SPG11-203ENST00000535302 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 C17orf82Q86X59 251 aaPredicted RBP10.2□□□□□ -0.78
SPG11-203ENST00000535302 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 FAM90A9PA6NNJ1 464 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 PPBPP02775 128 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 SEC11AP67812 179 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 ZC2HC1BQ5TFG8 222 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 Q6ZQT7 251 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 LIME1Q9H400 295 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 ARMS2P0C7Q2 107 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 MYMXA0A1B0GTQ4 84 aa10.2□□□□□ -0.78
SPG11-203ENST00000535302 FGF16O43320 207 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 LHFPL1Q86WI0 220 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 G3V318 75 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 WNK2Q9Y3S1 2297 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 IGHG3P01860 377 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 HIST3H2BBQ8N257 126 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 ATP6V0E1O15342 81 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 TCTEX1D4Q5JR98 221 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 Q6ZRM9 215 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 SPTBN2O15020 2390 aa10.19□□□□□ -0.78
SPG11-203ENST00000535302 TRPM7Q96QT4 1865 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 MMP23AO75900 390 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 MINOS1Q5TGZ0 78 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 MINOS1-NBL1R4GNA1 71 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 C22orf46C9J442 243 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 KLF5Q13887 457 aaPredicted RBP10.18□□□□□ -0.78
SPG11-203ENST00000535302 TRGV9Q99603 122 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 ANGP03950 147 aaKnown RBP10.18□□□□□ -0.78
SPG11-203ENST00000535302 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 WIPF3A6NGB9 483 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 PRSS29PA6NIE9 313 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 MRPL52Q86TS9 123 aaKnown RBP10.18□□□□□ -0.78
SPG11-203ENST00000535302 C15orf62A8K5M9 175 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
SPG11-203ENST00000535302 LINC01551Q86U37 167 aa10.18□□□□□ -0.78
SPG11-203ENST00000535302 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 PLXND1Q9Y4D7 1925 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 M0R1W7 72 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 UBE2BP63146 152 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 Q6ZS92 163 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 HELZP42694 1942 aaKnown RBP10.17□□□□□ -0.78
SPG11-203ENST00000535302 CACNA1EQ15878 2313 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 SLC25A16P16260 332 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 MPZP25189 248 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 DKK4Q9UBT3 224 aa10.17□□□□□ -0.78
SPG11-203ENST00000535302 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 TNFSF13O75888 250 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 QRFPP83859 136 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 RPL18AQ02543 176 aaKnown RBP10.16□□□□□ -0.78
SPG11-203ENST00000535302 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 K7EMI3 77 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 TIMM17AQ99595 171 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 RNASE2P10153 161 aaKnown RBP10.16□□□□□ -0.78
SPG11-203ENST00000535302 ZNF503-AS2A6NEH8 195 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 XCL1P47992 114 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 UBE2CO00762 179 aa10.16□□□□□ -0.78
SPG11-203ENST00000535302 CRLF1O75462 422 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms