RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 C19orf71A6NCJ1 209 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 FER1L6-AS1Q8NA97 138 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 NCOR2Q9Y618 2525 aa12.62□□□□□ -0.39
MCF2L-232ENST00000535094 HAX1O00165 279 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 SH2D1AO60880 128 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 SEC11AP67812 179 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 COL25A1Q9BXS0 654 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-232ENST00000535094 HLA-DMBP28068 263 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 RPL11P62913 178 aaKnown RBP12.61□□□□□ -0.39
MCF2L-232ENST00000535094 PSG3Q16557 428 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 LCNL1Q6ZST4 164 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 ASCL5Q7RTU5 278 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 PRSS22Q9GZN4 317 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 K7ERJ3 54 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 ECSCRQ19T08 205 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 CT83Q5H943 113 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-232ENST00000535094 MAP1LC3AQ9H492 121 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 C1RLQ9NZP8 487 aa12.61□□□□□ -0.39
MCF2L-232ENST00000535094 MAP1AP78559 2803 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-232ENST00000535094 KLRD1Q13241 179 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 MSRB1Q9NZV6 116 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 JKAMPQ9P055 326 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 SMIM12Q96EX1 92 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 GFRA4Q9GZZ7 299 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 SORL1Q92673 2214 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 NPYP01303 97 aa12.6□□□□□ -0.39
MCF2L-232ENST00000535094 IGKV1-17P01599 117 aa12.59□□□□□ -0.39
MCF2L-232ENST00000535094 SMIM13P0DJ93 91 aa12.59□□□□□ -0.39
MCF2L-232ENST00000535094 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
MCF2L-232ENST00000535094 LINC01545Q5VT33 79 aa12.59□□□□□ -0.39
MCF2L-232ENST00000535094 TEX36Q5VZQ5 186 aa12.59□□□□□ -0.39
MCF2L-232ENST00000535094 C7orf69Q9H7B7 122 aa12.59□□□□□ -0.39
MCF2L-232ENST00000535094 OR1N2Q8NGR9 330 aa12.59□□□□□ -0.39
MCF2L-232ENST00000535094 SMAD7O15105 426 aaKnown RBP12.58□□□□□ -0.39
MCF2L-232ENST00000535094 CD3EP07766 207 aa12.58□□□□□ -0.39
MCF2L-232ENST00000535094 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.39
MCF2L-232ENST00000535094 MFAP4P55083 255 aa12.58□□□□□ -0.39
MCF2L-232ENST00000535094 NCOR1P1Q9H4R4 102 aa12.58□□□□□ -0.39
MCF2L-232ENST00000535094 A0A0G2JNJ9 132 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 Q9UFV3 132 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 LAMA5O15230 3695 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 MYCNOSP40205 109 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 SMAGPQ0VAQ4 97 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 TMEM155Q4W5P6 130 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 SAMD5Q5TGI4 173 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 FAM71F2Q6NXP2 309 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 FAM169BQ8N8A8 192 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
MCF2L-232ENST00000535094 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 HSD52Q0P140 79 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 ERCC8Q13216 396 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 BUB1B-PAK6H3BSN5 160 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 SCGB2A1O75556 95 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 NDUFA3O95167 84 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 FAM104BQ5XKR9 115 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 SHANK2-AS3Q9BTD1 123 aa12.57□□□□□ -0.4
MCF2L-232ENST00000535094 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
MCF2L-232ENST00000535094 C9orf118A6NHY6 69 aa12.56□□□□□ -0.4
MCF2L-232ENST00000535094 ABHD17AQ96GS6 310 aa12.56□□□□□ -0.4
MCF2L-232ENST00000535094 HIST1H4GQ99525 98 aa12.56□□□□□ -0.4
MCF2L-232ENST00000535094 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
MCF2L-232ENST00000535094 S100A4P26447 101 aaKnown RBP12.55□□□□□ -0.4
MCF2L-232ENST00000535094 BMI1P35226 326 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 ZC2HC1BQ5TFG8 222 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 FAM57AQ8TBR7 257 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 VGLL1Q99990 258 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 SPRY2O43597 315 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 CLEC3BP05452 202 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 RPL7P18124 248 aaKnown RBP12.55□□□□□ -0.4
MCF2L-232ENST00000535094 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 ZNF491Q8N8L2 437 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 DMXL1Q9Y485 3027 aa12.55□□□□□ -0.4
MCF2L-232ENST00000535094 CRXO43186 299 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-232ENST00000535094 Q6AWC8 147 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 RNF182Q8N6D2 247 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 CRIP1P50238 77 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-232ENST00000535094 JMJD8Q96S16 334 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
MCF2L-232ENST00000535094 E7EQL1 145 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 NBR2O15453 112 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 TIMD4Q96H15 378 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 C2CD3Q4AC94 2353 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 TRAV26-2A0A0B4J265 109 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-232ENST00000535094 NDUFS7O75251 213 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 RBPJQ06330 500 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 RAI1Q7Z5J4 1906 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-232ENST00000535094 FSTL3O95633 263 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 OR4X2Q8NGF9 303 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
MCF2L-232ENST00000535094 FCN3O75636 299 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms