RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 CD14P08571 375 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 BAALC-AS2P0C853 105 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 P0C880 135 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 ZNF25P17030 456 aaPredicted RBP1.9□□□□□ -2.11
ME3-211ENST00000534638 KRTAP12-2P59991 146 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 QRFPP83859 136 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 CLLU1Q5K131 121 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 TMEM91Q6ZNR0 172 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 ARL17AQ8IVW1 177 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 LINC00311Q8N616 119 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 OR5D14Q8NGL3 314 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 SPACA4Q8TDM5 124 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 C1orf54Q8WWF1 131 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 OR4C12Q96R67 309 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 C14orf132Q9NPU4 83 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 DNAJC15Q9Y5T4 150 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
ME3-211ENST00000534638 NCAPD3P42695 1498 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 SBF1O95248 1867 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 ZNF670-ZNF695F2Z2N8 137 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 C5orf67F2Z3F1 127 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 C17orf112F2Z3M2 114 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 CD2P06729 351 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 MIFP14174 115 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 PCBD1P61457 104 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 EMX2Q04743 252 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 HAGHLQ6PII5 290 aaPredicted RBP1.89□□□□□ -2.11
ME3-211ENST00000534638 GLIPR1L1Q6UWM5 242 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 CCL4L1Q8NHW4 92 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 MAGOHBQ96A72 148 aaKnown RBP1.89□□□□□ -2.11
ME3-211ENST00000534638 CST11Q9H112 138 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 CST9LQ9H4G1 147 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 ARHGEF11O15085 1522 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 KDM5BQ9UGL1 1544 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 FANCMQ8IYD8 2048 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 MYO9BQ13459 2157 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 FRMPD1Q5SYB0 1578 aa1.89□□□□□ -2.11
ME3-211ENST00000534638 PXDNLA1KZ92 1463 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 IGKV1D-17A0A075B6S4 117 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 TRGV4A0A0C4DH28 118 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 LOC100130705A0A1B0GUX0 176 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 MIF4GDA9UHW6 222 aaKnown RBP1.88□□□□□ -2.11
ME3-211ENST00000534638 ATP6V1G2-DDX39BF2Z307 99 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 IGKV1-17P01599 117 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 CD3DP04234 171 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 ZNF93P35789 620 aaPredicted RBP1.88□□□□□ -2.11
ME3-211ENST00000534638 GNG8Q9UK08 70 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 LSM2Q9Y333 95 aaKnown RBP1.88□□□□□ -2.11
ME3-211ENST00000534638 KIAA1549Q9HCM3 1950 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 MGAMO43451 1857 aa1.88□□□□□ -2.11
ME3-211ENST00000534638 ADGRB3O60242 1522 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 PIK3C2AO00443 1686 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 LTBP2Q14767 1821 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 LOC107986453A0A1B0GWG9 222 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 TCRBV4S1A1TA0A5B7 111 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 C9orf170A2RU37 121 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 C2orf70A6NJV1 201 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 RTEL1-TNFRSF6BF6WH68 1400 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 H3BRN7 92 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 TRACP01848 142 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 PRB2P02812 416 aaPredicted RBP1.87□□□□□ -2.11
ME3-211ENST00000534638 HIST1H1BP16401 226 aaKnown RBP1.87□□□□□ -2.11
ME3-211ENST00000534638 CIRBPQ14011 172 aaKnown RBP1.87□□□□□ -2.11
ME3-211ENST00000534638 HCP5Q6MZN7 132 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 C10orf111Q8N326 155 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 OTOSQ8NHW6 89 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 Q8TAT8 98 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 TMEM254Q8TBM7 123 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 SFT2D1Q8WV19 159 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 PRG4Q92954 1404 aaPredicted RBP1.87□□□□□ -2.11
ME3-211ENST00000534638 SDF2Q99470 211 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 KRTAP4-3Q9BYR4 195 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 TTTY12Q9BZ98 90 aa1.87□□□□□ -2.11
ME3-211ENST00000534638 ZFHX2Q9C0A1 2572 aaPredicted RBP1.87□□□□□ -2.11
ME3-211ENST00000534638 COL1A2P08123 1366 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 GLI3P10071 1580 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 TRAV10A0A0B4J240 114 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 TRAV12-1A0A0B4J245 112 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 C3orf85A0A1B0GTC6 90 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 E7EUB6 86 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 S100PP25815 95 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 CKS2P33552 79 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 DSCR4P56555 118 aaPredicted RBP1.86□□□□□ -2.11
ME3-211ENST00000534638 LSM3P62310 102 aaKnown RBP1.86□□□□□ -2.11
ME3-211ENST00000534638 Q1T7F1 81 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 CCSMST1Q4G0I0 132 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 IZUMO2Q6UXV1 221 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 RPS19BP1Q86WX3 136 aaKnown RBP1.86□□□□□ -2.11
ME3-211ENST00000534638 FAM19A2Q8N3H0 131 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 MUCL1Q96DR8 90 aa1.86□□□□□ -2.11
ME3-211ENST00000534638 TRPM1Q7Z4N2 1603 aa1.85□□□□□ -2.11
ME3-211ENST00000534638 TRAV14DV4A0A0A6YYC5 116 aa1.85□□□□□ -2.11
ME3-211ENST00000534638 A0A0G2JMM0 328 aa1.85□□□□□ -2.11
ME3-211ENST00000534638 A0A1W2PNU3 283 aaPredicted RBP1.85□□□□□ -2.11
ME3-211ENST00000534638 A0A1W2PPB8 328 aa1.85□□□□□ -2.11
ME3-211ENST00000534638 FAM92AA1XBS5 289 aa1.85□□□□□ -2.11
ME3-211ENST00000534638 KIR3DP1A8MWS1 328 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms