RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 KTN1Q86UP2 1357 aaKnown RBP1.91□□□□□ -2.1
HIPK3-206ENST00000534262 RTL9Q8NET4 1388 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 A0A0G2JQZ4 141 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 LOC107984640A0A0U1RRK4 108 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 EFCAB10A6NFE3 127 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 SDHAF1A6NFY7 115 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 A8MWV9 139 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 C9JAW5 83 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 CST7O76096 145 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 DBIP07108 87 aaKnown RBP1.91□□□□□ -2.1
HIPK3-206ENST00000534262 MIFP14174 115 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 SDC4P31431 198 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 TMBIM6P55061 237 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 AQP4P55087 323 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 ROMO1P60602 79 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 CKS1BP61024 79 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 DPPA3Q6W0C5 159 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 LRRC18Q8N456 261 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 SLC30A7Q8NEW0 376 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 NAT14Q8WUY8 206 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 DIRC1Q969H9 104 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 GINS4Q9BRT9 223 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 ADAT1Q9BUB4 502 aaKnown RBP1.91□□□□□ -2.1
HIPK3-206ENST00000534262 NPCDR1Q9BY65 106 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 TPT1P8Q9HAU6 139 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 BCL2L10Q9HD36 194 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 TMEM138Q9NPI0 162 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 NHP2Q9NX24 153 aaKnown RBP1.91□□□□□ -2.1
HIPK3-206ENST00000534262 HIGD1AQ9Y241 93 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 HS3ST2Q9Y278 367 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 NRAPQ86VF7 1730 aa1.91□□□□□ -2.1
HIPK3-206ENST00000534262 KDM6AO15550 1401 aaPredicted RBP1.91□□□□□ -2.1
HIPK3-206ENST00000534262 CPSF1Q10570 1443 aaKnown RBP1.91□□□□□ -2.1
HIPK3-206ENST00000534262 UBR2Q8IWV8 1755 aa1.9□□□□□ -2.1
HIPK3-206ENST00000534262 TOPAZ1Q8N9V7 1692 aa1.9□□□□□ -2.1
HIPK3-206ENST00000534262 TNRC6CQ9HCJ0 1690 aaKnown RBP1.9□□□□□ -2.1
HIPK3-206ENST00000534262 ADAMTS7Q9UKP4 1686 aa1.9□□□□□ -2.1
HIPK3-206ENST00000534262 CCDC88CQ9P219 2028 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 IGKV1D-42A0A075B6H8 117 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 RFPL4AA6NLU0 287 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 B4DSR2 109 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 E7EQL1 145 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 RFPL4AL1F8VTS6 287 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 K7ERJ3 54 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 SDCBPO00560 298 aaPredicted RBP1.9□□□□□ -2.11
HIPK3-206ENST00000534262 HIST1H2BKO60814 126 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 IGLV1-51P01701 117 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 C1QCP02747 245 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 HIST1H2BJP06899 126 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 TRGC1P0CF51 173 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 NDUFA5Q16718 116 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 BRMS1LQ5PSV4 323 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 DEFB123Q8N688 67 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 CBLN4Q9NTU7 201 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 TAS2R4Q9NYW5 299 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 HSPB8Q9UJY1 196 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 QSER1Q2KHR3 1735 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 NALCNQ8IZF0 1738 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 FMN2Q9NZ56 1722 aa1.9□□□□□ -2.11
HIPK3-206ENST00000534262 CICQ96RK0 1608 aaPredicted RBP1.9□□□□□ -2.11
HIPK3-206ENST00000534262 TRBV27A0A0K0K1C4 114 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 HMSDA8MTL9 139 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 LYZL6O75951 148 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 SDC2P34741 201 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 ZNF93P35789 620 aaPredicted RBP1.89□□□□□ -2.11
HIPK3-206ENST00000534262 RPL35P42766 123 aaKnown RBP1.89□□□□□ -2.11
HIPK3-206ENST00000534262 ESRGQ1W209 222 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 TMEM14EPQ6UXP3 125 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 OR8B3Q8NGG8 313 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 LINC00467Q9BRT7 94 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 FAM107BQ9H098 131 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 TCEAL2Q9H3H9 227 aaPredicted RBP1.89□□□□□ -2.11
HIPK3-206ENST00000534262 CACYBPQ9HB71 228 aaKnown RBP1.89□□□□□ -2.11
HIPK3-206ENST00000534262 GREB1Q4ZG55 1949 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 ECM29Q5VYK3 1845 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 SRCAPQ6ZRS2 3230 aa1.89□□□□□ -2.11
HIPK3-206ENST00000534262 SBF1O95248 1867 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 HEATR5AQ86XA9 2040 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 PDE4DIPQ5VU43 2346 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 K7EP13 123 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 OR1I1O60431 355 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 PMP2P02689 132 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 RPL22P35268 128 aaKnown RBP1.88□□□□□ -2.11
HIPK3-206ENST00000534262 RELAQ04206 551 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 ZNF181Q2M3W8 571 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 VMA21Q3ZAQ7 101 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 EIF5AL1Q6IS14 154 aaKnown RBP1.88□□□□□ -2.11
HIPK3-206ENST00000534262 OR8I2Q8N0Y5 310 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 CCL4L1Q8NHW4 92 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 TIMM21Q9BVV7 248 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 COL24A1Q17RW2 1714 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 KNDC1Q76NI1 1749 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 OBSL1O75147 1896 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 CPAMD8Q8IZJ3 1885 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 NRXN3Q9Y4C0 1643 aa1.88□□□□□ -2.11
HIPK3-206ENST00000534262 E9PCH4 1651 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 NHSQ6T4R5 1651 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 LMO7Q8WWI1 1683 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 ALS2Q96Q42 1657 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 A0A096LPI6 279 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms