RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ATG101Q9BSB4 218 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 CCDC32Q9BV29 185 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 WDR83OSQ9Y284 106 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 PXMP4Q9Y6I8 212 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 IGLC2P0DOY2 106 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.41
COPB1-211ENST00000534234 SULT1A1P50225 295 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 IL15RAQ13261 267 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 RAB32Q13637 225 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 GUK1Q16774 197 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 TMEM252Q8N6L7 170 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 PFDN5Q99471 154 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 C20orf144Q9BQM9 153 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 PARD6GQ9BYG4 376 aaPredicted RBP6.27□□□□□ -1.41
COPB1-211ENST00000534234 KRTAP17-1Q9BYP8 105 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 NOP10Q9NPE3 64 aaKnown RBP6.27□□□□□ -1.41
COPB1-211ENST00000534234 LYRM2Q9NU23 88 aaPredicted RBP6.27□□□□□ -1.41
COPB1-211ENST00000534234 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
COPB1-211ENST00000534234 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 NUDT3O95989 172 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 FAM3BP58499 235 aaPredicted RBP6.26□□□□□ -1.41
COPB1-211ENST00000534234 HBG1P69891 147 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 HBG2P69892 147 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 BAXQ07812 192 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 VWC2Q2TAL6 325 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 SOHLH1Q5JUK2 328 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 MZT2BQ6NZ67 158 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 STX12Q86Y82 276 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 CCDC28AQ8IWP9 274 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 RNASE8Q8TDE3 154 aaKnown RBP6.26□□□□□ -1.41
COPB1-211ENST00000534234 TMEM263Q8WUH6 116 aaKnown RBP6.26□□□□□ -1.41
COPB1-211ENST00000534234 ZNF586Q9NXT0 402 aa6.26□□□□□ -1.41
COPB1-211ENST00000534234 UBE2L5PA0A1B0GUS4 154 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 J3KRW8 73 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 CT45A10P0DMU9 189 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 ATP6V1FQ16864 119 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 C1orf134Q5TEV5 83 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 GFI1BQ5VTD9 330 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 LINC00299Q6ZSB3 139 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 CHAC2Q8WUX2 184 aa6.25□□□□□ -1.41
COPB1-211ENST00000534234 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
COPB1-211ENST00000534234 TRAV12-3A0A0B4J271 114 aa6.24□□□□□ -1.41
COPB1-211ENST00000534234 FGF7P21781 194 aa6.24□□□□□ -1.41
COPB1-211ENST00000534234 CCL18P55774 89 aa6.24□□□□□ -1.41
COPB1-211ENST00000534234 OR5I1Q13606 314 aa6.24□□□□□ -1.41
COPB1-211ENST00000534234 GPN1Q9HCN4 374 aaPredicted RBP6.24□□□□□ -1.41
COPB1-211ENST00000534234 SNURFLB1AK76 121 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 M0R3E3 92 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 ZNF253O75346 499 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 MPDU1O75352 247 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 RLN2P04090 185 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 MED14OSP0DP75 135 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 HIST1H1EP10412 219 aaKnown RBP6.23□□□□□ -1.41
COPB1-211ENST00000534234 LEPP41159 167 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 NHLH2Q02577 135 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 ASAH1Q13510 395 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 ZNRF2Q8NHG8 242 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 RNF141Q8WVD5 230 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 S100ZQ8WXG8 99 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 ODF3Q96PU9 254 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 TMEM14CQ9P0S9 112 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 HECTD4Q9Y4D8 3996 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 GAGE12BA1L429 117 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 GAGE7O76087 117 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 NDUFB4O95168 129 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 SIX6O95475 246 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 GAGE12FP0CL80 117 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 GAGE12GP0CL81 117 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 GAGE12IP0CL82 117 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 ERCC8Q13216 396 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 CLINT1Q14677 625 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 GCSAMLQ5JQS6 135 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 LINC00612Q8N6U2 182 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 BLNKQ8WV28 456 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 MRPL53Q96EL3 112 aaKnown RBP6.23□□□□□ -1.41
COPB1-211ENST00000534234 PYGO2Q9BRQ0 406 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 NPCDR1Q9BY65 106 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
COPB1-211ENST00000534234 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 NBDYA0A0U1RRE5 68 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 SLC25A5P05141 298 aaKnown RBP6.22□□□□□ -1.41
COPB1-211ENST00000534234 PYYP10082 97 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 PDE6HQ13956 83 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 SSX7Q7RTT5 188 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 EXOC3-AS1Q8N2X6 119 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 OR5C1Q8NGR4 320 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 THAP6Q8TBB0 222 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 ENKURQ8TC29 256 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 GNPNAT1Q96EK6 184 aaPredicted RBP6.22□□□□□ -1.41
COPB1-211ENST00000534234 LINC00477Q96M19 166 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 SLC25A31Q9H0C2 315 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 PRELID1Q9Y255 219 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 LINC00588Q9Y4M8 146 aa6.22□□□□□ -1.41
COPB1-211ENST00000534234 DNAH2Q9P225 4427 aa6.21□□□□□ -1.42
COPB1-211ENST00000534234 A0A0J9YY99 117 aa6.21□□□□□ -1.42
COPB1-211ENST00000534234 E5RGE8 158 aa6.21□□□□□ -1.42
COPB1-211ENST00000534234 M6PRP20645 277 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms