RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 TNFAIP8O95379 198 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 CXCL2P19875 107 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 CCR6P51684 374 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 C4orf46Q504U0 113 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 RNASE10Q5GAN6 216 aaKnown RBP6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 Q6ZNX1 250 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 IL22RA2Q969J5 263 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 MRPL32Q9BYC8 188 aaKnown RBP6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 RBKSQ9H477 322 aa6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 RCL1Q9Y2P8 373 aaKnown RBP6.15□□□□□ -1.42
SOX9-AS1-213ENST00000533996 LOC100506127A0A0U1RQW1 187 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PRAF2O60831 178 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SRIP30626 198 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TIRAPP58753 221 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 FHL2Q14192 279 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 ANXA2RQ3ZCQ2 193 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 MORN5Q5VZ52 161 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TMEM268Q5VZI3 342 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CCDC190Q86UF4 302 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 IQCF2Q8IXL9 164 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 OR13C8Q8NGS7 320 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 VGLL1Q99990 258 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SHANK2-AS3Q9BTD1 123 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CHAC1Q9BUX1 264 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 NAA60Q9H7X0 242 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 GSN-AS1Q9NRJ2 163 aa6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 C14orf166Q9Y224 244 aaKnown RBP6.14□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TRAV12-3A0A0B4J271 114 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 IGHV3-38A0A0C4DH36 116 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 K7EQD1 137 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 IGLV2-8P01709 118 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 APOA1P02647 267 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 ORM1P02763 201 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 LEPP41159 167 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PLP1P60201 277 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SMCO1Q147U7 214 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 IBA57Q5T440 356 aaKnown RBP6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 ACOT7LQ6ZUV0 252 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 ZNF431Q8TF32 576 aaPredicted RBP6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TXNDC17Q9BRA2 123 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TM2D2Q9BX73 214 aa6.13□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CD3DP04234 171 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SLC25A5P05141 298 aaKnown RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 AKR1C4P17516 323 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 GATA2P23769 480 aaPredicted RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TCL1AP56279 114 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 RPP30P78346 268 aaKnown RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SURF2Q15527 256 aaPredicted RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 LCN15Q6UWW0 184 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TMEM182Q6ZP80 229 aaPredicted RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SNX29P2Q8IUI4 249 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 EIF4E3Q8N5X7 224 aaKnown RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 MARCH1Q8TCQ1 289 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PCNPQ8WW12 178 aaKnown RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TRIM63Q969Q1 353 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CNBD2Q96M20 576 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 RTBDNQ9BSG5 229 aaPredicted RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 ZNF331Q9NQX6 463 aaPredicted RBP6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 HIGD1AQ9Y241 93 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 KCNIP3Q9Y2W7 256 aa6.12□□□□□ -1.43
SOX9-AS1-213ENST00000533996 LRP2P98164 4655 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PIGBOS1A0A0B4J2F0 54 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CRYM-AS1A6NIL9 109 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 HYPMO75409 117 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CIRBP-AS1Q8TBR5 109 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PARD6GQ9BYG4 376 aaPredicted RBP6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 KLF12Q9Y4X4 402 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TNXBP22105 4242 aa6.11□□□□□ -1.43
SOX9-AS1-213ENST00000533996 A0A0B4J2A0 478 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TRGV4A0A0C4DH28 118 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PMS2P5A8MQ11 134 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 PRSS46E5RG02 174 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 E5RGE8 158 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 IGLV2-11P01706 119 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 CT45A10P0DMU9 189 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 ANXA7P20073 488 aaKnown RBP6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TNFSF8P32971 234 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SELENOTP62341 195 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 LAGE3Q14657 143 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SCGB2B2Q4G0G5 96 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 Q6ZRU5 148 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 TMEM229BQ8NBD8 167 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 MTFP1Q9UDX5 166 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 SHPKQ9UHJ6 478 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 GPR132Q9UNW8 380 aa6.1□□□□□ -1.43
SOX9-AS1-213ENST00000533996 C7orf71A4D174 169 aa6.09□□□□□ -1.43
SOX9-AS1-213ENST00000533996 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
SOX9-AS1-213ENST00000533996 C9JCJ5 164 aa6.09□□□□□ -1.43
SOX9-AS1-213ENST00000533996 MED6O75586 246 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms