RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TSPAN5P62079 268 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 BTN1A1Q13410 526 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 SP6Q3SY56 376 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 GPR107Q5VW38 600 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 GTSF1Q8WW33 167 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 ARPC5LQ9BPX5 153 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 GTSF1LQ9H1H1 148 aa6.59□□□□□ -1.35
CSDE1-215ENST00000533818 TRAV26-2A0A0B4J265 109 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 FAM231BA6NCW3 169 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 NOTOA8MTQ0 251 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 RGS10O43665 173 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 CIB2O75838 187 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 CLEC2LP0C7M8 214 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 PGAM2P15259 253 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 UCP3P55916 312 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 SRSF3P84103 164 aaKnown RBP6.58□□□□□ -1.36
CSDE1-215ENST00000533818 MLLT11Q13015 90 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-215ENST00000533818 MEF2DQ14814 521 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 C4orf48Q5BLP8 95 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 LGI3Q8N145 548 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
CSDE1-215ENST00000533818 ZNF331Q9NQX6 463 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-215ENST00000533818 A0A0A6YYH2 397 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 TRAV4A0A0B4J268 109 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 IGHV3-16A0A0C4DH30 117 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 C3orf85A0A1B0GTC6 90 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 A6NJ64 397 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 PMS2P5A8MQ11 134 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 PRSS1P07477 247 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 PI3P19957 117 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 RND3P61587 244 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 ZFP1Q6P2D0 407 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 TMEM182Q6ZP80 229 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-215ENST00000533818 RASL10AQ92737 203 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 TMEM222Q9H0R3 208 aa6.57□□□□□ -1.36
CSDE1-215ENST00000533818 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 KLLNB2CW77 178 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 USP17L23D6RBM5 183 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 SNRPCP09234 159 aaKnown RBP6.56□□□□□ -1.36
CSDE1-215ENST00000533818 OR10J4P0C629 311 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 GATA1P15976 413 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-215ENST00000533818 CXCL2P19875 107 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 ANXA7P20073 488 aaKnown RBP6.56□□□□□ -1.36
CSDE1-215ENST00000533818 HLA-DMAP28067 261 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 PIGPP57054 158 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 RAP2BP61225 183 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 RPL19P84098 196 aaKnown RBP6.56□□□□□ -1.36
CSDE1-215ENST00000533818 SRSF9Q13242 221 aaKnown RBP eCLIP6.56□□□□□ -1.36
CSDE1-215ENST00000533818 LCN15Q6UWW0 184 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 LYSMD2Q8IV50 215 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 C8orf59Q8N0T1 100 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-215ENST00000533818 DHRSXQ8N5I4 330 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 OR1S1Q8NH92 325 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 UBE2WQ96B02 151 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 SLC25A38Q96DW6 304 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 SLC50A1Q9BRV3 221 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 PLAC8Q9NZF1 115 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 HIGD1AQ9Y241 93 aa6.56□□□□□ -1.36
CSDE1-215ENST00000533818 CCSO14618 274 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 GNAO1P09471 354 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 SEC11BP0C7V7 166 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 OPCMLQ14982 345 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 OR4D10Q8NGI6 311 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 OR5H6Q8NGV6 325 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 MGLLQ99685 303 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 PRADC1Q9BSG0 188 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 PSORS1C2Q9UIG4 136 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 ANAPC10Q9UM13 185 aa6.55□□□□□ -1.36
CSDE1-215ENST00000533818 HYPMO75409 117 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 GPX1P07203 203 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 ATP5IP56385 69 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-215ENST00000533818 C22orf42Q6IC83 251 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 ATRAIDQ6UW56 229 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 Q6ZQT7 251 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 SLC25A29Q8N8R3 303 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 OR51M1Q9H341 326 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 CACFD1Q9UGQ2 172 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 URGCP-MRPS24S4R325 110 aa6.54□□□□□ -1.36
CSDE1-215ENST00000533818 TRDV1A0A1B0GX56 115 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 OR5G3P0C626 314 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 OR4E1P0C645 316 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 RCVRNP35243 200 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-215ENST00000533818 ERCC8Q13216 396 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 DTD1Q8TEA8 209 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 ZNF486Q96H40 463 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-215ENST00000533818 SPXQ9BT56 116 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
CSDE1-215ENST00000533818 H3BTX0 84 aa6.52□□□□□ -1.37
CSDE1-215ENST00000533818 SLC17A3O00476 420 aa6.52□□□□□ -1.37
CSDE1-215ENST00000533818 MRPS12O15235 138 aaKnown RBP6.52□□□□□ -1.37
CSDE1-215ENST00000533818 NIT1Q86X76 327 aa6.52□□□□□ -1.37
CSDE1-215ENST00000533818 TEX13DA0A0J9YY54 714 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-215ENST00000533818 CDS2O95674 445 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms