RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ATP6V1FQ16864 119 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 VWC2Q2TAL6 325 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 OR10J6PQ8NGY7 276 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 SUN5Q8TC36 379 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 VPS13DQ5THJ4 4388 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 KMT2AQ03164 3969 aa7.43□□□□□ -1.22
CAPN1-225ENST00000533704 NACAE9PAV3 2078 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 P0DMU3 169 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 FAM231AP0DMU4 169 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 FAM231CP0DMU5 169 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 IGLC2P0DOY2 106 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 DEFB130BP0DP73 79 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 DEFB130AP0DP74 79 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 AZU1P20160 251 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 RPL29P47914 159 aaKnown RBP7.42□□□□□ -1.22
CAPN1-225ENST00000533704 NHLH2Q02577 135 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 CD300CQ08708 224 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 CLINT1Q14677 625 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 FCN2Q15485 313 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 THAP6Q8TBB0 222 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 ARPC5LQ9BPX5 153 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 SLC25A31Q9H0C2 315 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 OR5AC2Q9NZP5 309 aa7.42□□□□□ -1.22
CAPN1-225ENST00000533704 E5RGE8 158 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 M0R2N4 97 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 SSNA1O43805 119 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 PRAF2O60831 178 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 CDKN1BP46527 198 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 KIR3DS1Q14943 382 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 GUK1Q16774 197 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 ZFP69Q49AA0 526 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 GCSAMLQ5JQS6 135 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 TMEM88Q6PEY1 159 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 IQCF2Q8IXL9 164 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 TMEM256Q8N2U0 113 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 POM121L12Q8N7R1 296 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 OR5C1Q8NGR4 320 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 NPCDR1Q9BY65 106 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 ZNF586Q9NXT0 402 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 TIMM9Q9Y5J7 89 aa7.41□□□□□ -1.22
CAPN1-225ENST00000533704 LYRM9A8MSI8 78 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 MPDU1O75352 247 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 PYYP10082 97 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 TSPOP30536 169 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 TAS2R60P59551 318 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 IFITM2Q01629 132 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 BLNKQ8WV28 456 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 SAT2Q96F10 170 aaPredicted RBP7.4□□□□□ -1.22
CAPN1-225ENST00000533704 FAM210BQ96KR6 192 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 NMES1Q9C002 83 aa7.4□□□□□ -1.22
CAPN1-225ENST00000533704 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 IGLV2-18A0A075B6J9 118 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 F5H768 121 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 H0YIZ8 118 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 M0R3E3 92 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 HIST1H1EP10412 219 aaKnown RBP7.39□□□□□ -1.23
CAPN1-225ENST00000533704 LEPP41159 167 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 CYCSP99999 105 aaKnown RBP7.39□□□□□ -1.23
CAPN1-225ENST00000533704 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
CAPN1-225ENST00000533704 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
CAPN1-225ENST00000533704 FRAS1Q86XX4 4008 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 TRBV19A0A075B6N1 114 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 PLAC8L1A1L4L8 177 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 H7BYZ3 331 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 H2BFSP57053 126 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 ERCC8Q13216 396 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 MIR17HGQ75NE6 70 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 CCDC28AQ8IWP9 274 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 EXOC3-AS1Q8N2X6 119 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 PPP1R1CQ8WVI7 109 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 MARVELD1Q9BSK0 173 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 SLC25A2Q9BXI2 301 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 SMIM3Q9BZL3 60 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 AAMDCQ9H7C9 122 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 NOP10Q9NPE3 64 aaKnown RBP7.38□□□□□ -1.23
CAPN1-225ENST00000533704 KCNIP2Q9NS61 270 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 TMEM14CQ9P0S9 112 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 TIMM8BQ9Y5J9 83 aaPredicted RBP7.38□□□□□ -1.23
CAPN1-225ENST00000533704 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
CAPN1-225ENST00000533704 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 NUDT3O95989 172 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 ATP5G1P05496 136 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 ATP5G3P48201 142 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 FAM122CQ6P4D5 195 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 ZNF493Q6ZR52 646 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 TMEM263Q8WUH6 116 aaKnown RBP7.37□□□□□ -1.23
CAPN1-225ENST00000533704 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 ATG101Q9BSB4 218 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
CAPN1-225ENST00000533704 PRELID1Q9Y255 219 aa7.37□□□□□ -1.23
CAPN1-225ENST00000533704 SNURFLB1AK76 121 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 C17orf112F2Z3M2 114 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 ZNF253O75346 499 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 NDUFB4O95168 129 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 MPC2O95563 127 aa7.36□□□□□ -1.23
CAPN1-225ENST00000533704 OR10J4P0C629 311 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms