RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 M0R3E3 92 aa12.92□□□□□ -0.34
NXF1-216ENST00000533499 ZNF253O75346 499 aa12.92□□□□□ -0.34
NXF1-216ENST00000533499 HIST1H1AQ02539 215 aaPredicted RBP12.92□□□□□ -0.34
NXF1-216ENST00000533499 GDF5OSQ5U4N7 250 aa12.92□□□□□ -0.34
NXF1-216ENST00000533499 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
NXF1-216ENST00000533499 ASCL2Q99929 193 aa12.92□□□□□ -0.34
NXF1-216ENST00000533499 RBMY1BA6NDE4 496 aaKnown RBP12.91□□□□□ -0.34
NXF1-216ENST00000533499 RBMY1EA6NEQ0 496 aaKnown RBP12.91□□□□□ -0.34
NXF1-216ENST00000533499 RBMY1DP0C7P1 496 aaKnown RBP12.91□□□□□ -0.34
NXF1-216ENST00000533499 SAV1Q9H4B6 383 aaPredicted RBP12.91□□□□□ -0.34
NXF1-216ENST00000533499 CLEC5AQ9NY25 188 aa12.91□□□□□ -0.34
NXF1-216ENST00000533499 PGPA6NDG6 321 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 TEX46H3BTG2 121 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 CSN1S1P47710 185 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 CMTM2Q8TAZ6 248 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 MBD3L1Q8WWY6 194 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 PPP1R14DQ9NXH3 145 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
NXF1-216ENST00000533499 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
NXF1-216ENST00000533499 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
NXF1-216ENST00000533499 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
NXF1-216ENST00000533499 MEGF8Q7Z7M0 2845 aa12.89□□□□□ -0.35
NXF1-216ENST00000533499 A0A0J9YX75 114 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 H3BMM0 161 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 DUSP14O95147 198 aaKnown RBP12.88□□□□□ -0.35
NXF1-216ENST00000533499 SLC25A5P05141 298 aaKnown RBP12.88□□□□□ -0.35
NXF1-216ENST00000533499 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 FXYD7P58549 80 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 CST9LP1Q5W188 147 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 LYPD1Q8N2G4 141 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
NXF1-216ENST00000533499 A8MZ25 164 aa12.87□□□□□ -0.35
NXF1-216ENST00000533499 IFNA7P01567 189 aa12.87□□□□□ -0.35
NXF1-216ENST00000533499 HBE1P02100 147 aa12.87□□□□□ -0.35
NXF1-216ENST00000533499 CNN1P51911 297 aaKnown RBP12.87□□□□□ -0.35
NXF1-216ENST00000533499 APOC4P55056 127 aa12.87□□□□□ -0.35
NXF1-216ENST00000533499 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
NXF1-216ENST00000533499 TRPT1Q86TN4 253 aaKnown RBP12.87□□□□□ -0.35
NXF1-216ENST00000533499 IGKV2-40A0A087WW87 121 aaPredicted RBP12.86□□□□□ -0.35
NXF1-216ENST00000533499 IGKV2D-40P01614 121 aaPredicted RBP12.86□□□□□ -0.35
NXF1-216ENST00000533499 GNG5P63218 68 aa12.86□□□□□ -0.35
NXF1-216ENST00000533499 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
NXF1-216ENST00000533499 HAGHQ16775 308 aa12.86□□□□□ -0.35
NXF1-216ENST00000533499 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
NXF1-216ENST00000533499 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
NXF1-216ENST00000533499 GNG13Q9P2W3 67 aa12.86□□□□□ -0.35
NXF1-216ENST00000533499 YTHDF2Q9Y5A9 579 aaKnown RBP12.86□□□□□ -0.35
NXF1-216ENST00000533499 PAGE4O60829 102 aa12.85□□□□□ -0.35
NXF1-216ENST00000533499 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
NXF1-216ENST00000533499 CCL20P78556 96 aa12.85□□□□□ -0.35
NXF1-216ENST00000533499 ERCC8Q13216 396 aa12.85□□□□□ -0.35
NXF1-216ENST00000533499 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
NXF1-216ENST00000533499 SUN5Q8TC36 379 aa12.85□□□□□ -0.35
NXF1-216ENST00000533499 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
NXF1-216ENST00000533499 CSTL1Q9H114 145 aa12.85□□□□□ -0.35
NXF1-216ENST00000533499 A0A1W2PRE2 83 aa12.84□□□□□ -0.35
NXF1-216ENST00000533499 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
NXF1-216ENST00000533499 NUTF2P61970 127 aaKnown RBP12.84□□□□□ -0.35
NXF1-216ENST00000533499 GOLT1AQ6ZVE7 132 aa12.84□□□□□ -0.35
NXF1-216ENST00000533499 SBSPONQ8IVN8 264 aa12.84□□□□□ -0.35
NXF1-216ENST00000533499 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
NXF1-216ENST00000533499 SLC35B3Q9H1N7 401 aa12.84□□□□□ -0.35
NXF1-216ENST00000533499 FAM74A7A6NL05 159 aa12.83□□□□□ -0.36
NXF1-216ENST00000533499 PPT1P50897 306 aa12.83□□□□□ -0.36
NXF1-216ENST00000533499 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
NXF1-216ENST00000533499 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
NXF1-216ENST00000533499 C5orf17Q8NAS9 161 aa12.83□□□□□ -0.36
NXF1-216ENST00000533499 B9D2Q9BPU9 175 aa12.83□□□□□ -0.36
NXF1-216ENST00000533499 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
NXF1-216ENST00000533499 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
NXF1-216ENST00000533499 DIRC3C9JPN6 131 aa12.82□□□□□ -0.36
NXF1-216ENST00000533499 J3KRW8 73 aa12.82□□□□□ -0.36
NXF1-216ENST00000533499 DEFB135Q30KP9 77 aa12.82□□□□□ -0.36
NXF1-216ENST00000533499 TMEM78Q5T7P6 136 aa12.82□□□□□ -0.36
NXF1-216ENST00000533499 VGLL1Q99990 258 aa12.82□□□□□ -0.36
NXF1-216ENST00000533499 KIR2DL5BA0A0G2JN68 375 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 KIR2DL5BA0A0G2JPC4 375 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 M0R2Z0 102 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 IFNA1P01562 189 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 ATP5G3P48201 142 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 KIR2DL5AQ8N109 375 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 SGK494Q96LW2 274 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 RETNQ9HD89 108 aa12.81□□□□□ -0.36
NXF1-216ENST00000533499 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 K7EQM0 130 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 UBE2CO00762 179 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 Q8TAT8 98 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 NKX6-2Q9C056 277 aaPredicted RBP12.8□□□□□ -0.36
NXF1-216ENST00000533499 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 EPDR1Q9UM22 224 aa12.8□□□□□ -0.36
NXF1-216ENST00000533499 C11orf94C9JXX5 98 aa12.79□□□□□ -0.36
NXF1-216ENST00000533499 TCRAP04437 139 aa12.79□□□□□ -0.36
NXF1-216ENST00000533499 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
NXF1-216ENST00000533499 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
NXF1-216ENST00000533499 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms