RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NBEAP1P0C6P0 100 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 M6PRP20645 277 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 OR2G3Q8NGZ4 309 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 PSMG3Q9BT73 122 aaPredicted RBP14.73□□□□□ -0.05
CCS-208ENST00000533244 PRELID1Q9Y255 219 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 GOLT1BQ9Y3E0 138 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 SACSQ9NZJ4 4579 aa14.73□□□□□ -0.05
CCS-208ENST00000533244 NUPR2A6NF83 97 aa14.72□□□□□ -0.05
CCS-208ENST00000533244 M0R3E3 92 aa14.72□□□□□ -0.05
CCS-208ENST00000533244 NANOS2P60321 138 aaKnown RBP14.72□□□□□ -0.05
CCS-208ENST00000533244 ACOT6Q3I5F7 207 aaPredicted RBP14.72□□□□□ -0.05
CCS-208ENST00000533244 BLNKQ8WV28 456 aa14.72□□□□□ -0.05
CCS-208ENST00000533244 RNF141Q8WVD5 230 aa14.72□□□□□ -0.05
CCS-208ENST00000533244 NPIPB6E9PJ23 425 aa14.71□□□□□ -0.05
CCS-208ENST00000533244 INSP01308 110 aa14.71□□□□□ -0.05
CCS-208ENST00000533244 CEMP1Q6PRD7 247 aaPredicted RBP14.71□□□□□ -0.05
CCS-208ENST00000533244 BAP18Q8IXM2 172 aa14.71□□□□□ -0.05
CCS-208ENST00000533244 HSD17B11Q8NBQ5 300 aa14.71□□□□□ -0.05
CCS-208ENST00000533244 OR10J6PQ8NGY7 276 aa14.71□□□□□ -0.05
CCS-208ENST00000533244 IGHV3OR16-12A0A075B7B8 117 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 OR7C2O60412 319 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 OR10J4P0C629 311 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 ATP6V0CP27449 155 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 TAS2R45P59539 299 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 RAB2AP61019 212 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 KHDC3LQ587J8 217 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 EXOC3-AS1Q8N2X6 119 aa14.7□□□□□ -0.06
CCS-208ENST00000533244 PHLDA1Q8WV24 401 aaPredicted RBP14.69□□□□□ -0.06
CCS-208ENST00000533244 PHYHIPLQ96FC7 376 aa14.69□□□□□ -0.06
CCS-208ENST00000533244 ODF3Q96PU9 254 aa14.69□□□□□ -0.06
CCS-208ENST00000533244 AAMDCQ9H7C9 122 aa14.69□□□□□ -0.06
CCS-208ENST00000533244 TRAV12-2A0A075B6T6 113 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 LCE6AA0A183 80 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 TMEM189A5PLL7 270 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 CDKN1BP46527 198 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 UBE2L3P68036 154 aaKnown RBP14.68□□□□□ -0.06
CCS-208ENST00000533244 ICAM4Q14773 271 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 RPL7L1Q6DKI1 246 aaKnown RBP14.68□□□□□ -0.06
CCS-208ENST00000533244 PPP1R14DQ9NXH3 145 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 CELA1Q9UNI1 258 aa14.68□□□□□ -0.06
CCS-208ENST00000533244 SMLR1H3BR10 107 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 SERF2P84101 59 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 OR10G4Q8NGN3 311 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 OR10G9Q8NGN4 311 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 OR10G7Q8NGN6 311 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 SH3BGRL3Q9H299 93 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 RYR2Q92736 4967 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 ALMS1Q8TCU4 4167 aa14.67□□□□□ -0.06
CCS-208ENST00000533244 ARPC5O15511 151 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 EIF3GO75821 320 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCS-208ENST00000533244 HBE1P02100 147 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 CT45A10P0DMU9 189 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 FAM122CQ6P4D5 195 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 PQLC2Q6ZP29 291 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 LYPD1Q8N2G4 141 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 RPP25LQ8N5L8 163 aaKnown RBP14.66□□□□□ -0.06
CCS-208ENST00000533244 BORCS7-ASMTA0A0B4J1R7 106 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 A0A1W2PPV4 95 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 TSPOP30536 169 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 RRN3P1Q2M238 152 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 TMEM256Q8N2U0 113 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 GNPNAT1Q96EK6 184 aaPredicted RBP14.66□□□□□ -0.06
CCS-208ENST00000533244 TMEM208Q9BTX3 173 aa14.66□□□□□ -0.06
CCS-208ENST00000533244 DNAH1Q9P2D7 4330 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 LOC102723971A0A1B0GUV8 181 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 TAAR5O14804 337 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 MBP02144 154 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 KIR3DS1Q14943 382 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 FAM19A4Q96LR4 140 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 C20orf144Q9BQM9 153 aa14.65□□□□□ -0.06
CCS-208ENST00000533244 KLK5Q9Y337 293 aaPredicted RBP14.65□□□□□ -0.06
CCS-208ENST00000533244 STAG3L2P0CL84 134 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 STAG3L3P0CL85 134 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 CDC34P49427 236 aaPredicted RBP14.64□□□□□ -0.07
CCS-208ENST00000533244 C12orf74Q32Q52 190 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 GFI1BQ5VTD9 330 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 C9orf47Q6ZRZ4 202 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 Q6ZTC4 211 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 AGPAT4-IT1Q9H0P7 198 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 Q9H3A6 140 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 CYTL1Q9NRR1 136 aa14.64□□□□□ -0.07
CCS-208ENST00000533244 C11orf94C9JXX5 98 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 JTBO76095 146 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 LEPP41159 167 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 RANP62826 216 aaKnown RBP14.63□□□□□ -0.07
CCS-208ENST00000533244 ERCC8Q13216 396 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 ZNF345Q14585 488 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 OR11H4Q8NGC9 324 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 LINC00477Q96M19 166 aa14.63□□□□□ -0.07
CCS-208ENST00000533244 IGKV2-40A0A087WW87 121 aaPredicted RBP14.62□□□□□ -0.07
CCS-208ENST00000533244 HMSDA8MTL9 139 aa14.62□□□□□ -0.07
CCS-208ENST00000533244 ZNF705GA8MUZ8 300 aaPredicted RBP14.62□□□□□ -0.07
CCS-208ENST00000533244 IGKV2D-40P01614 121 aaPredicted RBP14.62□□□□□ -0.07
CCS-208ENST00000533244 SPART-AS1P0CW21 52 aa14.62□□□□□ -0.07
CCS-208ENST00000533244 RAB24Q969Q5 203 aa14.62□□□□□ -0.07
CCS-208ENST00000533244 DKK2Q9UBU2 259 aa14.62□□□□□ -0.07
CCS-208ENST00000533244 TEX48A0A1B0GUV7 120 aa14.61□□□□□ -0.07
CCS-208ENST00000533244 HMGB3O15347 200 aaKnown RBP14.61□□□□□ -0.07
CCS-208ENST00000533244 PRM2P04554 102 aa14.61□□□□□ -0.07
CCS-208ENST00000533244 EMP1P54849 157 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms