RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 RCHY1Q96PM5 261 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 RYR2Q92736 4967 aa6.32□□□□□ -1.4
NEDD8-207ENST00000533242 SMIM27A0A1W2PRY6 76 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 CRISP2P16562 243 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 SUB1P53999 127 aaKnown RBP eCLIP6.31□□□□□ -1.4
NEDD8-207ENST00000533242 GDF5OSQ5U4N7 250 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 CMTM2Q8TAZ6 248 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 SRSF12Q8WXF0 261 aaKnown RBP6.31□□□□□ -1.4
NEDD8-207ENST00000533242 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 FAM103A1Q9BTL3 118 aaKnown RBP6.31□□□□□ -1.4
NEDD8-207ENST00000533242 GNB4Q9HAV0 340 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 RPH3ALQ9UNE2 315 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 ZNF256Q9Y2P7 627 aaPredicted RBP6.31□□□□□ -1.4
NEDD8-207ENST00000533242 GP9P14770 177 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 PRR27Q6MZM9 219 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 OR1L4Q8NGR5 311 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 RPEQ96AT9 228 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 NAT8BQ9UHF3 227 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 F11RQ9Y624 299 aaKnown RBP6.31□□□□□ -1.4
NEDD8-207ENST00000533242 SMAD5-AS1Q9Y6J3 95 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 S4R3C0 116 aa6.31□□□□□ -1.4
NEDD8-207ENST00000533242 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 TSTD3H0UI37 97 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 I3L2K1 104 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 BMPR1BO00238 502 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 IGHG2P01859 326 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 IGLC1P0CG04 106 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 PSG1P11464 419 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 SLAQ13239 276 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 BAGE2Q86Y30 109 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 NUDT10Q8NFP7 164 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 NUDT11Q96G61 164 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 MS4A10Q96PG2 267 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 TRGV9Q99603 122 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 GNB1LQ9BYB4 327 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 PGPA6NDG6 321 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 TMEM11P17152 192 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 RNF2Q99496 336 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 EPDR1Q9UM22 224 aa6.3□□□□□ -1.4
NEDD8-207ENST00000533242 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 TRAV8-1A0A0A6YYK1 113 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 K7EIM0 57 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
NEDD8-207ENST00000533242 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 SLC25A5P05141 298 aaKnown RBP6.29□□□□□ -1.4
NEDD8-207ENST00000533242 NBEAP1P0C6P0 100 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 ESDP10768 282 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 TAS2R60P59551 318 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 FOXE3Q13461 319 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 SBSPONQ8IVN8 264 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 RNF152Q8N8N0 203 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 C17orf77Q96MU5 243 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 HSPB9Q9BQS6 159 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 LINC00527Q9UJ94 153 aa6.29□□□□□ -1.4
NEDD8-207ENST00000533242 A0A1B0GV90 55 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 RPLP1P05386 114 aaKnown RBP6.28□□□□□ -1.4
NEDD8-207ENST00000533242 SRIP30626 198 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 INSL3P51460 131 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 LYZP61626 148 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 Q0VG73 95 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 MMDQ15546 238 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 IQCJQ1A5X6 159 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 DEFB136Q30KP8 78 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 ZNF600Q6ZNG1 722 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 BAGE3Q86Y29 109 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 NUP35Q8NFH5 326 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 SSBP4Q9BWG4 385 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-207ENST00000533242 ZNF586Q9NXT0 402 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 NAGKQ9UJ70 344 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 ZNF785A8K8V0 405 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 HYPMO75409 117 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 ELANEP08246 267 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 NDPQ00604 133 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 FHL3Q13643 280 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 HES1Q14469 280 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 PLGLAQ15195 96 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 TMEM183BQ1AE95 376 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 ETFRF1Q6IPR1 90 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 EXOC3-AS1Q8N2X6 119 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 NEU1Q99519 415 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 MLST8Q9BVC4 326 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 Q9H3A6 140 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 FBXL7Q9UJT9 491 aa6.28□□□□□ -1.4
NEDD8-207ENST00000533242 IZUMO1RA6ND01 250 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 EREGO14944 169 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 PLP1P60201 277 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 EBI3Q14213 229 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 ZFAND6Q6FIF0 208 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 TCF24Q7RTU0 167 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 Q8N976 141 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 C4orf3Q8WVX3 66 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 KLF12Q9Y4X4 402 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 TRBV9A0A0B4J1U6 114 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 A0A1W2PS18 150 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 LINC01548A6NM66 108 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 HIGD1CA8MV81 97 aa6.27□□□□□ -1.41
NEDD8-207ENST00000533242 CNIH1O95406 144 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms