RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
COL16A1-217ENST00000532877 MRPL53Q96EL3 112 aaKnown RBP10.65□□□□□ -0.7
COL16A1-217ENST00000532877 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
COL16A1-217ENST00000532877 CLEC5AQ9NY25 188 aa10.65□□□□□ -0.7
COL16A1-217ENST00000532877 LOC102723971A0A1B0GUV8 181 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 ZNF705FA8MVS1 300 aaPredicted RBP10.64□□□□□ -0.71
COL16A1-217ENST00000532877 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 CD7P09564 240 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
COL16A1-217ENST00000532877 CD81P60033 236 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 SUMO1P63165 101 aaKnown RBP10.64□□□□□ -0.71
COL16A1-217ENST00000532877 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 C5orf17Q8NAS9 161 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 FAM210AQ96ND0 272 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
COL16A1-217ENST00000532877 RBFOX3A6NFN3 312 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 SLC25A5P05141 298 aaKnown RBP10.63□□□□□ -0.71
COL16A1-217ENST00000532877 TAGLN2P37802 199 aaKnown RBP10.63□□□□□ -0.71
COL16A1-217ENST00000532877 DEFB131AP59861 70 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 DEFB1P60022 68 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 GNG5P63218 68 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 MEF2BQ02080 365 aaPredicted RBP10.63□□□□□ -0.71
COL16A1-217ENST00000532877 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 CCDC28AQ8IWP9 274 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 CMTM2Q8TAZ6 248 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
COL16A1-217ENST00000532877 RARRES2Q99969 163 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 FAM110AQ9BQ89 295 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 VAX2Q9UIW0 290 aa10.63□□□□□ -0.71
COL16A1-217ENST00000532877 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 PRAC2D3DTV9 90 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 RXFP4Q8TDU9 374 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 PRR25Q96S07 402 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 TXNDC17Q9BRA2 123 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 WFDC10AQ9H1F0 79 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 C19orf73Q9NVV2 129 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 ZMAT5Q9UDW3 170 aaKnown RBP10.62□□□□□ -0.71
COL16A1-217ENST00000532877 RPH3ALQ9UNE2 315 aa10.62□□□□□ -0.71
COL16A1-217ENST00000532877 DIRC3C9JPN6 131 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 F6UB75 175 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 CSN1S1P47710 185 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 CMC4P56277 68 aaPredicted RBP10.61□□□□□ -0.71
COL16A1-217ENST00000532877 ZNF124Q15973 351 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 TCEAL7Q9BRU2 100 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 EIF5A2Q9GZV4 153 aaKnown RBP10.61□□□□□ -0.71
COL16A1-217ENST00000532877 EPDR1Q9UM22 224 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 COL7A1Q02388 2944 aa10.61□□□□□ -0.71
COL16A1-217ENST00000532877 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
COL16A1-217ENST00000532877 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 PEX7O00628 323 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
COL16A1-217ENST00000532877 TCRAP04437 139 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 KPRPQ5T749 579 aaPredicted RBP10.6□□□□□ -0.71
COL16A1-217ENST00000532877 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 FOXI2Q6ZQN5 318 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 GOLT1AQ6ZVE7 132 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 ARL6IP6Q8N6S5 226 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 ATG101Q9BSB4 218 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 SAV1Q9H4B6 383 aaPredicted RBP10.6□□□□□ -0.71
COL16A1-217ENST00000532877 MED9Q9NWA0 146 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 AGRNO00468 2067 aa10.6□□□□□ -0.71
COL16A1-217ENST00000532877 A0A0J9YX75 114 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 LINC00862A6NCI5 91 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 PDE6DO43924 150 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 ZNF705DP0CH99 300 aaPredicted RBP10.59□□□□□ -0.71
COL16A1-217ENST00000532877 ZNF705BP0CI00 300 aaPredicted RBP10.59□□□□□ -0.71
COL16A1-217ENST00000532877 SRSF3P84103 164 aaKnown RBP10.59□□□□□ -0.71
COL16A1-217ENST00000532877 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
COL16A1-217ENST00000532877 SERTM2A0A1B0GWG4 89 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 RAB19A4D1S5 217 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 F6UZH7 168 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 HIST1H1AQ02539 215 aaPredicted RBP10.58□□□□□ -0.72
COL16A1-217ENST00000532877 EBLN2Q6P2I7 272 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 COMMD7Q86VX2 200 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 Q8N1Y9 231 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 OR10J6PQ8NGY7 276 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 C2CD4CQ8TF44 421 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
COL16A1-217ENST00000532877 RBAKDNA6NC62 111 aa10.57□□□□□ -0.72
COL16A1-217ENST00000532877 NPIPB6E9PJ23 425 aa10.57□□□□□ -0.72
COL16A1-217ENST00000532877 CNN1P51911 297 aaKnown RBP10.57□□□□□ -0.72
COL16A1-217ENST00000532877 ERCC8Q13216 396 aa10.57□□□□□ -0.72
COL16A1-217ENST00000532877 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
COL16A1-217ENST00000532877 VGLL1Q99990 258 aa10.57□□□□□ -0.72
COL16A1-217ENST00000532877 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
COL16A1-217ENST00000532877 C9JQL5 133 aa10.56□□□□□ -0.72
COL16A1-217ENST00000532877 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
COL16A1-217ENST00000532877 H3BMM0 161 aa10.56□□□□□ -0.72
COL16A1-217ENST00000532877 K7EQM0 130 aa10.56□□□□□ -0.72
COL16A1-217ENST00000532877 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms