RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 OR5I1Q13606 314 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 GNPNAT1Q96EK6 184 aaPredicted RBP6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 GGACTQ9BVM4 153 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 ZNF331Q9NQX6 463 aaPredicted RBP6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 FLVCR2Q9UPI3 526 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 PXMP4Q9Y6I8 212 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 FRAS1Q86XX4 4008 aa6.77□□□□□ -1.33
PPFIA1-223ENST00000532793 FAM25EA8MYX2 175 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 SNRPCP09234 159 aaKnown RBP6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 PVALBP20472 110 aaPredicted RBP6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 CAV2P51636 162 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 SSX7Q7RTT5 188 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 ZBTB8BQ8NAP8 495 aaPredicted RBP6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 RNF141Q8WVD5 230 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 PFDN5Q99471 154 aa6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 RCL1Q9Y2P8 373 aaKnown RBP6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 LSM5Q9Y4Y9 91 aaKnown RBP6.76□□□□□ -1.33
PPFIA1-223ENST00000532793 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 C5orf51A6NDU8 294 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 J3KRW8 73 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 PRB4P10163 310 aaPredicted RBP6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 M6PRP20645 277 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 LEPP41159 167 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 CAMLGP49069 296 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 BAK1Q16611 211 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 GUK1Q16774 197 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 PATE2Q6UY27 113 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 C12orf45Q8N5I9 185 aaPredicted RBP6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 OR1L4Q8NGR5 311 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 ZNRF2Q8NHG8 242 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 RNASE8Q8TDE3 154 aaKnown RBP6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 MITD1Q8WV92 249 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
PPFIA1-223ENST00000532793 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 H3BTX0 84 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 ZNF701M0R085 212 aaPredicted RBP6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 GAGE7O76087 117 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 MGST2Q99735 147 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 C20orf85Q9H1P6 137 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 Q9H8V8 135 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 DNAJC4Q9NNZ3 241 aa6.74□□□□□ -1.33
PPFIA1-223ENST00000532793 TRAV12-3A0A0B4J271 114 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 A0A0J9YY99 117 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 MRPS12O15235 138 aaKnown RBP6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 MBPP02686 304 aaPredicted RBP6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 BTCP35070 178 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 S100A10P60903 97 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 HBG1P69891 147 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 HBG2P69892 147 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 BAXQ07812 192 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 OPCMLQ14982 345 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 GFI1BQ5VTD9 330 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 NRARPQ7Z6K4 114 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 STX12Q86Y82 276 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 RXFP4Q8TDU9 374 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 TMEM37Q8WXS4 190 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 ZNF503Q96F45 646 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 PYGO2Q9BRQ0 406 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 PARD6GQ9BYG4 376 aaPredicted RBP6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
PPFIA1-223ENST00000532793 TRGV2A0A075B6R0 118 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 UBE2L5PA0A1B0GUS4 154 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 SLC17A3O00476 420 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 CCSO14618 274 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 CST7O76096 145 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 IL7P13232 177 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 MIC13Q5XKP0 118 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 ZNF680Q8NEM1 530 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 ODF3Q96PU9 254 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 TIMM9Q9Y5J7 89 aa6.72□□□□□ -1.33
PPFIA1-223ENST00000532793 TRAV6A0A075B6T7 132 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 H3BNG1 76 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 LYRM1O43325 122 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 ZNF253O75346 499 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 SLC25A5P05141 298 aaKnown RBP6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 IGLC2P0DOY2 106 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 HOXA5P20719 270 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 S100A11P31949 105 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 ARL16Q0P5N6 197 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 MAPKAPK5-AS1Q8N8E1 139 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 SLC39A9Q9NUM3 307 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 PRELID1Q9Y255 219 aa6.71□□□□□ -1.34
PPFIA1-223ENST00000532793 HERC2O95714 4834 aa6.7□□□□□ -1.34
PPFIA1-223ENST00000532793 TRAV5A0A0B4J249 113 aa6.7□□□□□ -1.34
PPFIA1-223ENST00000532793 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
PPFIA1-223ENST00000532793 C7orf71A4D174 169 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms