RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 WFDC12Q8WWY7 111 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 TMEM14CQ9P0S9 112 aa12.23□□□□□ -0.45
PCDHA3-202ENST00000532566 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 FXYD5Q96DB9 178 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 G3V318 75 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 SYS1-DBNDD2H3BUS1 97 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 CRXO43186 299 aaPredicted RBP12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 IGHV2-70P01814 119 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 MSMBP08118 114 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 GRNP28799 593 aaKnown RBP12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 SUMO2P61956 95 aaKnown RBP12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 RHPN1-AS1Q9BWJ2 59 aa12.22□□□□□ -0.45
PCDHA3-202ENST00000532566 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.45
PCDHA3-202ENST00000532566 IGLV2-14P01704 120 aa12.21□□□□□ -0.45
PCDHA3-202ENST00000532566 IGHV1-69P01742 117 aa12.21□□□□□ -0.45
PCDHA3-202ENST00000532566 TNCP24821 2201 aa12.21□□□□□ -0.45
PCDHA3-202ENST00000532566 TRGV11A0A075B6L2 103 aa12.21□□□□□ -0.45
PCDHA3-202ENST00000532566 IGKCP01834 107 aa12.21□□□□□ -0.46
PCDHA3-202ENST00000532566 H3BRN7 92 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 LAGE3Q14657 143 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 MEIG1Q5JSS6 88 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 JKAMPQ9P055 326 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 SMPXQ9UHP9 88 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 SONP18583 2426 aaKnown RBP12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 OVOL3O00110 214 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 DMRTC2Q8IXT2 367 aaPredicted RBP12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 CEP192Q8TEP8 1941 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 MSMPQ1L6U9 139 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 ARL6IP6Q8N6S5 226 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 ERCC8Q13216 396 aa12.2□□□□□ -0.46
PCDHA3-202ENST00000532566 LINC01549A6NIU2 74 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 FCN3O75636 299 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 STHQ8IWL8 128 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 C5orf30Q96GV9 206 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 C2orf88Q9BSF0 95 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 SMIM27A0A1W2PRY6 76 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 Q6ZPA2 131 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 COPS9Q8WXC6 57 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 VCX2Q9H322 139 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 SSBP2P81877 361 aaPredicted RBP12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
PCDHA3-202ENST00000532566 hDV102S1A0JD36 115 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 C1orf122Q6ZSJ8 110 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 A8MWP6 167 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 GATA3P23771 443 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 C21orf62-AS1Q17RA5 79 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 FXYD7P58549 80 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 SLAQ13239 276 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 SPCS1Q9Y6A9 102 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 SMKR1H3BMG3 65 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 H3BUT2 72 aa12.18□□□□□ -0.46
PCDHA3-202ENST00000532566 NCKAP5O14513 1909 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 ZNF491Q8N8L2 437 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 POLR3KQ9Y2Y1 108 aaPredicted RBP12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 CHTOPQ9Y3Y2 248 aaKnown RBP12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 KMT2EQ8IZD2 1858 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 K7EN84 100 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 NDUFS7O75251 213 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 OR9G4Q8NGQ1 327 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 JMJD8Q96S16 334 aa12.17□□□□□ -0.46
PCDHA3-202ENST00000532566 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 TMEM213A2RRL7 107 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 APOMO95445 188 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 SEC11AP67812 179 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 C8orf49Q96NF6 230 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 PRR25Q96S07 402 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 TRAV12-3A0A0B4J271 114 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 TMEM101Q96IK0 257 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 C20orf144Q9BQM9 153 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 HSD52Q0P140 79 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 C14orf178Q8N769 122 aaPredicted RBP12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 CR1LQ2VPA4 569 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 MRAP2Q96G30 205 aa12.16□□□□□ -0.46
PCDHA3-202ENST00000532566 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 H3BRM9 83 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 ALKBH7Q9BT30 221 aaPredicted RBP12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 GUSBP1Q15486 140 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 FAM104BQ5XKR9 115 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 OR11H6Q8NGC7 330 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 NUP210LQ5VU65 1888 aa12.15□□□□□ -0.46
PCDHA3-202ENST00000532566 PRSS46E5RG02 174 aa12.15□□□□□ -0.47
PCDHA3-202ENST00000532566 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 IL17RELQ6ZVW7 336 aa12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 TMEM158Q8WZ71 300 aa12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 BEX4Q9NWD9 120 aaPredicted RBP12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 ARHGAP21Q5T5U3 1957 aa12.14□□□□□ -0.47
PCDHA3-202ENST00000532566 TDGF1P3P51864 188 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms