RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TRAV12-2A0A075B6T6 113 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 TEX48A0A1B0GUV7 120 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 LOC102723971A0A1B0GUV8 181 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 PRAC2D3DTV9 90 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 PDE6HQ13956 83 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 FCN2Q15485 313 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 SLC25A2Q9BXI2 301 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 MRPL32Q9BYC8 188 aaKnown RBP16.46■□□□□ 0.23
CAPN1-222ENST00000532285 SMIM3Q9BZL3 60 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 TIMM9Q9Y5J7 89 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 HYDINQ4G0P3 5121 aa16.46■□□□□ 0.23
CAPN1-222ENST00000532285 IGLL5B9A064 214 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 PYYP10082 97 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 CDKN1BP46527 198 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 ZNF767PQ75MW2 155 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 MIR17HGQ75NE6 70 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 TMEM256Q8N2U0 113 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 MRPL53Q96EL3 112 aaKnown RBP16.45■□□□□ 0.22
CAPN1-222ENST00000532285 FAM167A-AS1Q96KT0 104 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 PARD6GQ9BYG4 376 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-222ENST00000532285 DKK2Q9UBU2 259 aa16.45■□□□□ 0.22
CAPN1-222ENST00000532285 FUT9Q9Y231 359 aa16.44■□□□□ 0.22
CAPN1-222ENST00000532285 PRELID1Q9Y255 219 aa16.44■□□□□ 0.22
CAPN1-222ENST00000532285 DEFB131BA0A096LNP1 70 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 NDUFB4O95168 129 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 TSPOP30536 169 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 FFAR4Q5NUL3 377 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 FAM222AQ5U5X8 452 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 LGALS9CQ6DKI2 356 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 BLNKQ8WV28 456 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 OR51M1Q9H341 326 aa16.43■□□□□ 0.22
CAPN1-222ENST00000532285 ZNF705GA8MUZ8 300 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-222ENST00000532285 RPP25LQ8N5L8 163 aaKnown RBP16.42■□□□□ 0.22
CAPN1-222ENST00000532285 ASB13Q8WXK3 278 aa16.42■□□□□ 0.22
CAPN1-222ENST00000532285 LINC01587Q99440 93 aa16.42■□□□□ 0.22
CAPN1-222ENST00000532285 WFDC1Q9HC57 220 aa16.42■□□□□ 0.22
CAPN1-222ENST00000532285 YTHDF2Q9Y5A9 579 aaKnown RBP16.42■□□□□ 0.22
CAPN1-222ENST00000532285 NBEAP1P0C6P0 100 aa16.41■□□□□ 0.22
CAPN1-222ENST00000532285 RGS21Q2M5E4 152 aa16.41■□□□□ 0.22
CAPN1-222ENST00000532285 NIPSNAP3BQ9BS92 247 aa16.41■□□□□ 0.22
CAPN1-222ENST00000532285 PAXXQ9BUH6 204 aa16.41■□□□□ 0.22
CAPN1-222ENST00000532285 AAMDCQ9H7C9 122 aa16.41■□□□□ 0.22
CAPN1-222ENST00000532285 APLNQ9ULZ1 77 aa16.41■□□□□ 0.22
CAPN1-222ENST00000532285 NPIPB6E9PJ23 425 aa16.4■□□□□ 0.22
CAPN1-222ENST00000532285 M0R3E3 92 aa16.4■□□□□ 0.22
CAPN1-222ENST00000532285 OXA1LQ15070 435 aa16.4■□□□□ 0.22
CAPN1-222ENST00000532285 ODF3Q96PU9 254 aa16.4■□□□□ 0.22
CAPN1-222ENST00000532285 C20orf144Q9BQM9 153 aa16.4■□□□□ 0.22
CAPN1-222ENST00000532285 IGHV4-4A0A075B6R2 117 aa16.39■□□□□ 0.21
CAPN1-222ENST00000532285 PRM2P04554 102 aa16.39■□□□□ 0.21
CAPN1-222ENST00000532285 GIPP09681 153 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-222ENST00000532285 TAS2R60P59551 318 aa16.39■□□□□ 0.21
CAPN1-222ENST00000532285 EXOC3-AS1Q8N2X6 119 aa16.39■□□□□ 0.21
CAPN1-222ENST00000532285 RNF141Q8WVD5 230 aa16.39■□□□□ 0.21
CAPN1-222ENST00000532285 OR7C2O60412 319 aa16.38■□□□□ 0.21
CAPN1-222ENST00000532285 CT45A10P0DMU9 189 aa16.38■□□□□ 0.21
CAPN1-222ENST00000532285 LEPP41159 167 aa16.38■□□□□ 0.21
CAPN1-222ENST00000532285 FXYD5Q96DB9 178 aa16.38■□□□□ 0.21
CAPN1-222ENST00000532285 H7BYZ3 331 aa16.37■□□□□ 0.21
CAPN1-222ENST00000532285 OR10J4P0C629 311 aa16.37■□□□□ 0.21
CAPN1-222ENST00000532285 TAS2R45P59539 299 aa16.37■□□□□ 0.21
CAPN1-222ENST00000532285 ICAM4Q14773 271 aa16.37■□□□□ 0.21
CAPN1-222ENST00000532285 AQP10Q96PS8 301 aa16.37■□□□□ 0.21
CAPN1-222ENST00000532285 LYRM9A8MSI8 78 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 HTN1P15515 57 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 AZU1P20160 251 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 DAD1P61803 113 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 ZNF266Q14584 549 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 KIR3DS1Q14943 382 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 ACOT6Q3I5F7 207 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-222ENST00000532285 KHDC3LQ587J8 217 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 GFI1BQ5VTD9 330 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 LINC00477Q96M19 166 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 PLA2G2EQ9NZK7 142 aa16.36■□□□□ 0.21
CAPN1-222ENST00000532285 M6PRP20645 277 aa16.35■□□□□ 0.21
CAPN1-222ENST00000532285 Q5BKY6 102 aa16.35■□□□□ 0.21
CAPN1-222ENST00000532285 ZNF503Q96F45 646 aa16.35■□□□□ 0.21
CAPN1-222ENST00000532285 C16orf74Q96GX8 76 aa16.35■□□□□ 0.21
CAPN1-222ENST00000532285 ERCC8Q13216 396 aa16.34■□□□□ 0.21
CAPN1-222ENST00000532285 FAM122CQ6P4D5 195 aa16.34■□□□□ 0.21
CAPN1-222ENST00000532285 ZNF493Q6ZR52 646 aa16.34■□□□□ 0.21
CAPN1-222ENST00000532285 LYPD1Q8N2G4 141 aa16.34■□□□□ 0.21
CAPN1-222ENST00000532285 NDUFAF3Q9BU61 184 aa16.34■□□□□ 0.21
CAPN1-222ENST00000532285 AGPAT4-IT1Q9H0P7 198 aa16.34■□□□□ 0.21
CAPN1-222ENST00000532285 PLAC8L1A1L4L8 177 aa16.33■□□□□ 0.2
CAPN1-222ENST00000532285 J3KRW8 73 aa16.33■□□□□ 0.2
CAPN1-222ENST00000532285 UBE2L3P68036 154 aaKnown RBP16.33■□□□□ 0.2
CAPN1-222ENST00000532285 C9orf47Q6ZRZ4 202 aa16.33■□□□□ 0.2
CAPN1-222ENST00000532285 INO80EQ8NBZ0 244 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-222ENST00000532285 PHYHIPLQ96FC7 376 aa16.33■□□□□ 0.2
CAPN1-222ENST00000532285 FAM210BQ96KR6 192 aa16.33■□□□□ 0.2
CAPN1-222ENST00000532285 A0A1W2PPV4 95 aa16.32■□□□□ 0.2
CAPN1-222ENST00000532285 SLC25A5P05141 298 aaKnown RBP16.32■□□□□ 0.2
CAPN1-222ENST00000532285 RANP62826 216 aaKnown RBP16.32■□□□□ 0.2
CAPN1-222ENST00000532285 TRAV12-3A0A0B4J271 114 aa16.31■□□□□ 0.2
CAPN1-222ENST00000532285 TMEM78Q5T7P6 136 aa16.31■□□□□ 0.2
CAPN1-222ENST00000532285 CCDC28AQ8IWP9 274 aa16.31■□□□□ 0.2
CAPN1-222ENST00000532285 TMEM263Q8WUH6 116 aaKnown RBP16.31■□□□□ 0.2
CAPN1-222ENST00000532285 FAM19A4Q96LR4 140 aa16.31■□□□□ 0.2
CAPN1-222ENST00000532285 TIMM8BQ9Y5J9 83 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms