RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
PKP3-208ENST00000531857 RPL29P47914 159 aaKnown RBP12.42□□□□□ -0.42
PKP3-208ENST00000531857 PSMG4Q5JS54 123 aa12.42□□□□□ -0.42
PKP3-208ENST00000531857 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
PKP3-208ENST00000531857 TMEM144Q7Z5S9 345 aa12.42□□□□□ -0.42
PKP3-208ENST00000531857 NDUFAF3Q9BU61 184 aa12.42□□□□□ -0.42
PKP3-208ENST00000531857 ABCA13Q86UQ4 5058 aa12.42□□□□□ -0.42
PKP3-208ENST00000531857 IGKV1-17P01599 117 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 SFTA3P0C7M3 94 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 TIGITQ495A1 244 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 OR10G9Q8NGN4 311 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 OR10G7Q8NGN6 311 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 OR4X1Q8NH49 305 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 SLC35E1Q96K37 410 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 U3KQE9 123 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
PKP3-208ENST00000531857 DYNC1H1Q14204 4646 aaKnown RBP12.4□□□□□ -0.42
PKP3-208ENST00000531857 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 HELTA6NFD8 242 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 AGPAT2O15120 278 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 SCGB2A1O75556 95 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 PSMB3P49720 205 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 FHITP49789 147 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 MANBALQ9NQG1 85 aa12.4□□□□□ -0.42
PKP3-208ENST00000531857 A0A1W2PPV4 95 aa12.39□□□□□ -0.43
PKP3-208ENST00000531857 SMCO3A2RU48 225 aa12.39□□□□□ -0.43
PKP3-208ENST00000531857 AKR1C1Q04828 323 aa12.39□□□□□ -0.43
PKP3-208ENST00000531857 GLMPQ8WWB7 406 aa12.39□□□□□ -0.43
PKP3-208ENST00000531857 NKX6-2Q9C056 277 aaPredicted RBP12.39□□□□□ -0.43
PKP3-208ENST00000531857 IGLV2-18A0A075B6J9 118 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 SELENOTP62341 195 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 C16orf54Q6UWD8 224 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 ZNF575Q86XF7 245 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 VAX2Q9UIW0 290 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 DNAH11Q96DT5 4516 aa12.38□□□□□ -0.43
PKP3-208ENST00000531857 H3BMM0 161 aa12.37□□□□□ -0.43
PKP3-208ENST00000531857 BCL2P10415 239 aa12.37□□□□□ -0.43
PKP3-208ENST00000531857 CDC34P49427 236 aaPredicted RBP12.37□□□□□ -0.43
PKP3-208ENST00000531857 RHOBP62745 196 aa12.37□□□□□ -0.43
PKP3-208ENST00000531857 Q6ZR54 194 aa12.37□□□□□ -0.43
PKP3-208ENST00000531857 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
PKP3-208ENST00000531857 C1QTNF4Q9BXJ3 329 aa12.37□□□□□ -0.43
PKP3-208ENST00000531857 TRAV30A0A087WSZ9 112 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 LOC102723971A0A1B0GUV8 181 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 IGLC1P0CG04 106 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 EMP1P54849 157 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 FAM74A3Q4VXF1 159 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 PXMP4Q9Y6I8 212 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 ARL2-SNX15V9GYD0 113 aa12.36□□□□□ -0.43
PKP3-208ENST00000531857 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 B2MP61769 119 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 NUTF2P61970 127 aaKnown RBP12.35□□□□□ -0.43
PKP3-208ENST00000531857 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
PKP3-208ENST00000531857 RHEBQ15382 184 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
PKP3-208ENST00000531857 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 ZNF705AQ6ZN79 300 aaPredicted RBP12.35□□□□□ -0.43
PKP3-208ENST00000531857 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 MGST2Q99735 147 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 PRELID1Q9Y255 219 aa12.35□□□□□ -0.43
PKP3-208ENST00000531857 CXorf1O96002 111 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 FABP1P07148 127 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
PKP3-208ENST00000531857 SPART-AS1P0CW21 52 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 RND2P52198 227 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 DEFB1P60022 68 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 SNRPD3P62318 126 aaKnown RBP12.34□□□□□ -0.43
PKP3-208ENST00000531857 PNRC1Q12796 327 aaPredicted RBP12.34□□□□□ -0.43
PKP3-208ENST00000531857 UBE2DNLQ8IWF7 75 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 Q8WTZ3 238 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
PKP3-208ENST00000531857 ZNF705FA8MVS1 300 aaPredicted RBP12.33□□□□□ -0.44
PKP3-208ENST00000531857 B4DEV8 164 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 ZNF705DP0CH99 300 aaPredicted RBP12.33□□□□□ -0.44
PKP3-208ENST00000531857 ZNF705BP0CI00 300 aaPredicted RBP12.33□□□□□ -0.44
PKP3-208ENST00000531857 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 OR10J1P30954 320 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 FXYD7P58549 80 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 TAS2R45P59539 299 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 YPEL3P61236 119 aaPredicted RBP12.33□□□□□ -0.44
PKP3-208ENST00000531857 GAMTQ14353 236 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 ICAM4Q14773 271 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 ZNF726P1Q15940 193 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 FAM122CQ6P4D5 195 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 THAP8Q8NA92 274 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 CLRN3Q8NCR9 226 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 OR1L4Q8NGR5 311 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 PFDN5Q99471 154 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 NEU1Q99519 415 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 MRPL32Q9BYC8 188 aaKnown RBP12.33□□□□□ -0.44
PKP3-208ENST00000531857 NRN1Q9NPD7 142 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 GNG13Q9P2W3 67 aa12.33□□□□□ -0.44
PKP3-208ENST00000531857 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
PKP3-208ENST00000531857 BUB3O43684 328 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms