RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-212ENST00000531589 PRSS29PA6NIE9 313 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 F5H768 121 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 ZNF253O75346 499 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 SIX6O95475 246 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 PRM2P04554 102 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
SF3B2-212ENST00000531589 CCDC28AQ8IWP9 274 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 TMEM252Q8N6L7 170 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
SF3B2-212ENST00000531589 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
SF3B2-212ENST00000531589 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 C11orf1Q9H5F2 150 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 GPN1Q9HCN4 374 aaPredicted RBP9.28□□□□□ -0.92
SF3B2-212ENST00000531589 SLC39A9Q9NUM3 307 aa9.28□□□□□ -0.92
SF3B2-212ENST00000531589 UBE2L5PA0A1B0GUS4 154 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 H3BQ15 152 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 MPDU1O75352 247 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 IL15RAQ13261 267 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 RAB32Q13637 225 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 MORN5Q5VZ52 161 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 CHAC2Q8WUX2 184 aa9.27□□□□□ -0.93
SF3B2-212ENST00000531589 IGLV2-18A0A075B6J9 118 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 H3BTX0 84 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 SLC17A3O00476 420 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 RLN2P04090 185 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 LEPP41159 167 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
SF3B2-212ENST00000531589 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
SF3B2-212ENST00000531589 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 MARVELD1Q9BSK0 173 aa9.26□□□□□ -0.93
SF3B2-212ENST00000531589 TRAV5A0A0B4J249 113 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 IGSF23A1L1A6 192 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 RTL8CO15255 209 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 FGF7P21781 194 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 CCL18P55774 89 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 FCN2Q15485 313 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 GFI1BQ5VTD9 330 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 Q6ZR54 194 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 SLC25A31Q9H0C2 315 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 NOP10Q9NPE3 64 aaKnown RBP9.25□□□□□ -0.93
SF3B2-212ENST00000531589 TMEM14CQ9P0S9 112 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 PRELID1Q9Y255 219 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 ALG5Q9Y673 324 aa9.25□□□□□ -0.93
SF3B2-212ENST00000531589 DNAH6Q9C0G6 4158 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 TRBV19A0A075B6N1 114 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 NPIPB6E9PJ23 425 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 NUDT3O95989 172 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 PTTG1O95997 202 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 PRB4P10163 310 aaPredicted RBP9.24□□□□□ -0.93
SF3B2-212ENST00000531589 HIST1H1EP10412 219 aaKnown RBP9.24□□□□□ -0.93
SF3B2-212ENST00000531589 PDE6HQ13956 83 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 C1orf134Q5TEV5 83 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 PYGO2Q9BRQ0 406 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 AAMDCQ9H7C9 122 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 TIMM9Q9Y5J7 89 aa9.24□□□□□ -0.93
SF3B2-212ENST00000531589 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 E5RGE8 158 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 SSNA1O43805 119 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 CT45A10P0DMU9 189 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 CYCSP99999 105 aaKnown RBP9.23□□□□□ -0.93
SF3B2-212ENST00000531589 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 NMES1Q9C002 83 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 KCNIP2Q9NS61 270 aa9.23□□□□□ -0.93
SF3B2-212ENST00000531589 TRAV12-3A0A0B4J271 114 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 J3KRW8 73 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 PRAF2O60831 178 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 SLC25A5P05141 298 aaKnown RBP9.22□□□□□ -0.93
SF3B2-212ENST00000531589 CLINT1Q14677 625 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 OR5C1Q8NGR4 320 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
SF3B2-212ENST00000531589 PARD6GQ9BYG4 376 aaPredicted RBP9.22□□□□□ -0.93
SF3B2-212ENST00000531589 HECTD4Q9Y4D8 3996 aa9.21□□□□□ -0.93
SF3B2-212ENST00000531589 NHLH2Q02577 135 aa9.21□□□□□ -0.94
SF3B2-212ENST00000531589 OR5I1Q13606 314 aa9.21□□□□□ -0.94
SF3B2-212ENST00000531589 RGS21Q2M5E4 152 aa9.21□□□□□ -0.94
SF3B2-212ENST00000531589 LINC00612Q8N6U2 182 aa9.21□□□□□ -0.94
SF3B2-212ENST00000531589 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 M0R3E3 92 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 M6PRP20645 277 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 H2BFSP57053 126 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 LRRC37A5PQ49AS3 106 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 ZNF680Q8NEM1 530 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 BLNKQ8WV28 456 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 GNPNAT1Q96EK6 184 aaPredicted RBP9.2□□□□□ -0.94
SF3B2-212ENST00000531589 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
SF3B2-212ENST00000531589 DNAH2Q9P225 4427 aa9.19□□□□□ -0.94
SF3B2-212ENST00000531589 NBDYA0A0U1RRE5 68 aa9.19□□□□□ -0.94
SF3B2-212ENST00000531589 GAGE12BA1L429 117 aa9.19□□□□□ -0.94
SF3B2-212ENST00000531589 C7orf71A4D174 169 aa9.19□□□□□ -0.94
SF3B2-212ENST00000531589 GAGE7O76087 117 aa9.19□□□□□ -0.94
SF3B2-212ENST00000531589 NDUFB4O95168 129 aa9.19□□□□□ -0.94
SF3B2-212ENST00000531589 GPX1P07203 203 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms