RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 MAP1LC3B2A6NCE7 125 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 KHDC3LQ587J8 217 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 PQLC2Q6ZP29 291 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 Q8NAQ8 132 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 STXBP6Q8NFX7 210 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 SFT2D1Q8WV19 159 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 SCRT1Q9BWW7 348 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 MAP1LC3BQ9GZQ8 125 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
SCN4B-205ENST00000531550 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 TRAV5A0A0B4J249 113 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 CXorf1O96002 111 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 SLC25A2Q9BXI2 301 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 TMEM14CQ9P0S9 112 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 PKD1P98161 4303 aa13.09□□□□□ -0.31
SCN4B-205ENST00000531550 IGHV4-4A0A075B6R2 117 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.32
SCN4B-205ENST00000531550 FAM90A2PQ658T7 463 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 C16orf54Q6UWD8 224 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 GBGT1Q8N5D6 347 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 GPR82Q96P67 336 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
SCN4B-205ENST00000531550 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
SCN4B-205ENST00000531550 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
SCN4B-205ENST00000531550 EIF3GO75821 320 aaKnown RBP eCLIP13.07□□□□□ -0.32
SCN4B-205ENST00000531550 ARL14EPLP0DKL9 152 aa13.07□□□□□ -0.32
SCN4B-205ENST00000531550 RPL7P18124 248 aaKnown RBP13.07□□□□□ -0.32
SCN4B-205ENST00000531550 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
SCN4B-205ENST00000531550 OR8I2Q8N0Y5 310 aa13.07□□□□□ -0.32
SCN4B-205ENST00000531550 PCNPQ8WW12 178 aaKnown RBP13.07□□□□□ -0.32
SCN4B-205ENST00000531550 ZNF503Q96F45 646 aa13.07□□□□□ -0.32
SCN4B-205ENST00000531550 OR51M1Q9H341 326 aa13.07□□□□□ -0.32
SCN4B-205ENST00000531550 MRPS12O15235 138 aaKnown RBP13.06□□□□□ -0.32
SCN4B-205ENST00000531550 OR7C2O60412 319 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 RBMY1A1P0DJD3 496 aaKnown RBP13.06□□□□□ -0.32
SCN4B-205ENST00000531550 RBMY1CP0DJD4 496 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 FGF8P55075 233 aaPredicted RBP13.06□□□□□ -0.32
SCN4B-205ENST00000531550 RBMY1FQ15415 496 aaKnown RBP13.06□□□□□ -0.32
SCN4B-205ENST00000531550 Q6ZTC4 211 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 SUN5Q8TC36 379 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 GLMPQ8WWB7 406 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 PAXXQ9BUH6 204 aa13.06□□□□□ -0.32
SCN4B-205ENST00000531550 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 TRAV10A0A0B4J240 114 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 RTL8CO15255 209 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 GCHFRP30047 84 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 PSMB3P49720 205 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 TMEM167BQ9NRX6 74 aa13.05□□□□□ -0.32
SCN4B-205ENST00000531550 MUC4Q99102 2169 aa13.04□□□□□ -0.32
SCN4B-205ENST00000531550 CD5P06127 495 aa13.04□□□□□ -0.32
SCN4B-205ENST00000531550 HIST1H1EP10412 219 aaKnown RBP13.04□□□□□ -0.32
SCN4B-205ENST00000531550 DEFB131AP59861 70 aa13.04□□□□□ -0.32
SCN4B-205ENST00000531550 PAFAH1B2P68402 229 aa13.04□□□□□ -0.32
SCN4B-205ENST00000531550 TCF24Q7RTU0 167 aa13.04□□□□□ -0.32
SCN4B-205ENST00000531550 IGHV3-66A0A0C4DH42 116 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 IGLC2P0DOY2 106 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 PYYP10082 97 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 GALR1P47211 349 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 PPT1P50897 306 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 CCL20P78556 96 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 FXYD5Q96DB9 178 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 KRTAP4-5Q9BYR2 181 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 TMPRSS5Q9H3S3 457 aa13.03□□□□□ -0.32
SCN4B-205ENST00000531550 A0A087X0K7 114 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 A0A1B0GV50 99 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 HELTA6NFD8 242 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
SCN4B-205ENST00000531550 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 MIFP14174 115 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 MEOX2P50222 304 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 UBE2L3P68036 154 aaKnown RBP13.02□□□□□ -0.33
SCN4B-205ENST00000531550 GUK1Q16774 197 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 SIGLEC15Q6ZMC9 328 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 STHQ8IWL8 128 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 MED9Q9NWA0 146 aa13.02□□□□□ -0.33
SCN4B-205ENST00000531550 DNASE2O00115 360 aaPredicted RBP13.01□□□□□ -0.33
SCN4B-205ENST00000531550 AMBPP02760 352 aa13.01□□□□□ -0.33
SCN4B-205ENST00000531550 OR10J4P0C629 311 aa13.01□□□□□ -0.33
SCN4B-205ENST00000531550 POM121L12Q8N7R1 296 aa13.01□□□□□ -0.33
SCN4B-205ENST00000531550 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
SCN4B-205ENST00000531550 ARL2-SNX15V9GYD0 113 aa13.01□□□□□ -0.33
SCN4B-205ENST00000531550 LINC00862A6NCI5 91 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 H3BQ15 152 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 M0R2N4 97 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 PDE6HQ13956 83 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 IQCF2Q8IXL9 164 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 MANBALQ9NQG1 85 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 X6R8D5 127 aa13□□□□□ -0.33
SCN4B-205ENST00000531550 HSPG2P98160 4391 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
SCN4B-205ENST00000531550 A0A1W2PRE2 83 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms