RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TRAV19A0A0A6YYK7 116 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 IGKV1-8A0A0C4DH67 115 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 M0R129 80 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 IGKV1-5P01602 117 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 HBDP02042 147 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 HLA-DPB1P04440 258 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 IL5P05113 134 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 CXCL1P09341 107 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF688P0C7X2 276 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 IGHV3-43DP0DP04 118 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 COX6A1P12074 109 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 ZNF138P52744 262 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00313P59037 77 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
PTPRK-220ENST00000531466 RBMY1FQ15415 496 aaKnown RBP2.22□□□□□ -2.05
PTPRK-220ENST00000531466 UBE2SQ16763 222 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00303Q3SY05 128 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 C7orf65Q6ZTY9 151 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00173Q6ZV60 143 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 SCXQ7RTU7 201 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 COMMD6Q7Z4G1 85 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 PRNTQ86SH4 94 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 SIGLECL1Q8N7X8 197 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 OR8A1Q8NGG7 326 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 OR5C1Q8NGR4 320 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 LINC00597Q9H2U6 94 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 C16orf95Q9H693 158 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 A0A1B0GUL6 1792 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 VWA8A3KMH1 1905 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 ATG2AQ2TAZ0 1938 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 UGGT1Q9NYU2 1555 aa2.22□□□□□ -2.05
PTPRK-220ENST00000531466 BRCA1P38398 1863 aaKnown RBP2.22□□□□□ -2.05
PTPRK-220ENST00000531466 SCN4AP35499 1836 aa2.21□□□□□ -2.05
PTPRK-220ENST00000531466 C1orf167Q5SNV9 1468 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 CHD4Q14839 1912 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 IGKV1-27A0A075B6S5 117 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 UBE2L5PA0A1B0GUS4 154 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 GRIFINA4D1Z8 144 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 RBAKDNA6NC62 111 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 PEX7O00628 323 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 PLA2G10O15496 165 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 LYRM1O43325 122 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 LTAP01374 205 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 IGKV1-17P01599 117 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF823P16415 610 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 COX7A1P24310 79 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 AQP1P29972 269 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 UBE2AP49459 152 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 KRTDAPP60985 99 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 UBE2L3P68036 154 aaKnown RBP2.21□□□□□ -2.06
PTPRK-220ENST00000531466 FOXF1Q12946 379 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 PSMG4Q5JS54 123 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 FAM78AQ5JUQ0 283 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 XAF1Q6GPH4 301 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 GUSBP11Q6P575 273 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 AMN1Q8IY45 258 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 SLC25A29Q8N8R3 303 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF555Q8NEP9 628 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 DCANP1Q8TF63 244 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 TSKUQ8WUA8 353 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF714Q96N38 554 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 CHAC1Q9BUX1 264 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF492Q9P255 531 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 LSM2Q9Y333 95 aaKnown RBP2.21□□□□□ -2.06
PTPRK-220ENST00000531466 DNAJC15Q9Y5T4 150 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF706Q9Y5V0 76 aaPredicted RBP2.21□□□□□ -2.06
PTPRK-220ENST00000531466 OTOFQ9HC10 1997 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 KIF13BQ9NQT8 1826 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 KIAA0586Q9BVV6 1533 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 BAZ2AQ9UIF9 1905 aaKnown RBP2.21□□□□□ -2.06
PTPRK-220ENST00000531466 MYH4Q9Y623 1939 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 SCN11AQ9UI33 1791 aa2.21□□□□□ -2.06
PTPRK-220ENST00000531466 IQGAP3Q86VI3 1631 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 RAPGEF6Q8TEU7 1601 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 MADDQ8WXG6 1647 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 RALGAPBQ86X10 1494 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 NUP210Q8TEM1 1887 aaPredicted RBP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 CDC42BPAQ5VT25 1732 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 ADGRB1O14514 1584 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 DIP2CQ9Y2E4 1556 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 CRB1P82279 1406 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 C10orf71Q711Q0 1435 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 IGHV1-45A0A0A0MS14 117 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 A0A0D9SFI3 127 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 A8MWL6 223 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF736B4DX44 427 aaPredicted RBP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 UMAD1C9J7I0 102 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 C9JCJ5 164 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 SYS1-DBNDD2H3BUS1 97 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 IGKCP01834 107 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 BGLAPP02818 100 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 PRM2P04554 102 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 CBLN1P23435 193 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 DAPP51397 102 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF80P51504 273 aaPredicted RBP2.2□□□□□ -2.06
PTPRK-220ENST00000531466 ZNF136P52737 540 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 ELOBQ15370 118 aa2.2□□□□□ -2.06
PTPRK-220ENST00000531466 HMGN2P46Q86SG4 172 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms