RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TM4SF20Q53R12 229 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 OR9G4Q8NGQ1 327 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 C2CD4CQ8TF44 421 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 NRN1Q9NPD7 142 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 ZNF331Q9NQX6 463 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-228ENST00000531007 MLXQ9UH92 298 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 KLF12Q9Y4X4 402 aa7.5□□□□□ -1.21
CTNND1-228ENST00000531007 IGHV3OR16-8A0A075B7F1 116 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 TRAV2A0A0B4J234 112 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 C2orf70A6NJV1 201 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 ISLRO14498 428 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 ZNF207O43670 478 aaKnown RBP7.49□□□□□ -1.21
CTNND1-228ENST00000531007 APOHP02749 345 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-228ENST00000531007 TCRAP04437 139 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 CBLN1P23435 193 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 ID1P41134 155 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 AKR1C3P42330 323 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 PAFAH1B2P68402 229 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 TMEM183BQ1AE95 376 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 TMEM75Q8N9X5 138 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 SDF2L1Q9HCN8 221 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 BIN3Q9NQY0 253 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 SMAD5-AS1Q9Y6J3 95 aa7.49□□□□□ -1.21
CTNND1-228ENST00000531007 TRAV25A0A0B4J276 109 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 COL6A5A8TX70 2615 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 FOLR2P14207 255 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 RPL35P42766 123 aaKnown RBP7.48□□□□□ -1.21
CTNND1-228ENST00000531007 UBE2G1P62253 170 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 ZNF674Q2M3X9 581 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 CLRN3Q8NCR9 226 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 RAX2Q96IS3 184 aa7.48□□□□□ -1.21
CTNND1-228ENST00000531007 A0A087WWC5 75 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 DIRC3C9JPN6 131 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 PPP1R2P9O14990 202 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 GNG4P50150 75 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 SLURP1P55000 103 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 DEFB136Q30KP8 78 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 C18orf65Q6ZTR6 163 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 TCF24Q7RTU0 167 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 PRIMA1Q86XR5 153 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 ANAPC16Q96DE5 110 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 C16orf92Q96LL3 132 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 CTDSP1Q9GZU7 261 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 ZFP30Q9Y2G7 519 aa7.47□□□□□ -1.21
CTNND1-228ENST00000531007 IGHV3-66A0A0C4DH42 116 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 M0R036 132 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 SLC17A3O00476 420 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 OVOL1O14753 267 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 MT-ND4LP03901 98 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 RPL11P62913 178 aaKnown RBP7.46□□□□□ -1.22
CTNND1-228ENST00000531007 GUCA2BQ16661 112 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 SAPCD1Q5SSQ6 148 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 EXOC3-AS1Q8N2X6 119 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-228ENST00000531007 OR2K2Q8NGT1 345 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 DLX4Q92988 240 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-228ENST00000531007 C17orf77Q96MU5 243 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 CITED1Q99966 193 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 PPP1R14DQ9NXH3 145 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 CUBNO60494 3623 aa7.46□□□□□ -1.22
CTNND1-228ENST00000531007 IGHV3OR16-13A0A075B7E8 117 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 IGHV3-49A0A0A0MS15 119 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 IGHV3-74A0A0B4J1X5 117 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 TRBV7-9A0A0J9YWB2 115 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 CXorf65A6NEN9 183 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 SOCS3O14543 225 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 TSPAN4O14817 238 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 LTAP01374 205 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 CSN3P07498 182 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-228ENST00000531007 SNRPD3P62318 126 aaKnown RBP7.45□□□□□ -1.22
CTNND1-228ENST00000531007 RPL23P62829 140 aaKnown RBP7.45□□□□□ -1.22
CTNND1-228ENST00000531007 PSG3Q16557 428 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 AWAT1Q58HT5 328 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 CENPWQ5EE01 88 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 LCN12Q6JVE5 192 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 RBPMS2Q6ZRY4 209 aaKnown RBP7.45□□□□□ -1.22
CTNND1-228ENST00000531007 LINC01551Q86U37 167 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 BAGE2Q86Y30 109 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 C11orf44Q8N8P7 122 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 DYNLRB2Q8TF09 96 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 IGF2BP2-AS1Q96M15 143 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 TUBA4BQ9H853 241 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 LENEPQ9Y5L5 61 aa7.45□□□□□ -1.22
CTNND1-228ENST00000531007 A0A1W2PRX2 142 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 C7orf77A4D0Y5 90 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 H3BTX0 84 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 DNASE2O00115 360 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-228ENST00000531007 GCGP01275 180 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 FLI1Q01543 452 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-228ENST00000531007 ADIRFQ15847 76 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 ZNF124Q15973 351 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 GOLT1AQ6ZVE7 132 aa7.44□□□□□ -1.22
CTNND1-228ENST00000531007 COX8CQ7Z4L0 72 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms