RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 HOXB4P17483 251 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-227ENST00000530748 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-227ENST00000530748 DUX4L9Q6RFH8 374 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-227ENST00000530748 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 WDR81Q562E7 1941 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 IGHV1OR15-1A0A075B7D0 117 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 TMEM213A2RRL7 107 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 ZNF503-AS2A6NEH8 195 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 C15orf65H3BRN8 121 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 ADCYAP1P18509 176 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 FAM120AOSQ5T036 256 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 DNAJC30Q96LL9 226 aa6.79□□□□□ -1.32
CTNND1-227ENST00000530748 SMIM27A0A1W2PRY6 76 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 VWC2LB2RUY7 222 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 KIR3DS1Q14943 382 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 C1orf122Q6ZSJ8 110 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 THAP8Q8NA92 274 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 ZFAND6Q6FIF0 208 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 NEGR1Q7Z3B1 354 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 GAGE12JA6NER3 117 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 H3BUA1 57 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 CFHR3Q02985 330 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 GAGE1Q13065 139 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 GAGE4Q13068 117 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 GAGE5Q13069 117 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 MST1LQ2TV78 715 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 PRIMA1Q86XR5 153 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 LINC00479Q96M42 142 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
CTNND1-227ENST00000530748 TET1Q8NFU7 2136 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 INS-IGF2F8WCM5 200 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 PAX9P55771 341 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 FAM104BQ5XKR9 115 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 XCL2Q9UBD3 114 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 MYO7AQ13402 2215 aa6.78□□□□□ -1.32
CTNND1-227ENST00000530748 ZNF134P52741 427 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 G3V318 75 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 MAPK1IP1LQ8NDC0 245 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 F5H768 121 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 ZNF561-AS1K7EIQ3 104 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 C8orf31Q8N9H6 132 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 NUP210Q8TEM1 1887 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-227ENST00000530748 PMVKQ15126 192 aa6.77□□□□□ -1.33
CTNND1-227ENST00000530748 IGHV7-4-1A0A0J9YVY3 117 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 CR1LQ2VPA4 569 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 ZC2HC1BQ5TFG8 222 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 IGHV3-16A0A0C4DH30 117 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 CDKN1BP46527 198 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 ZNF726P1Q15940 193 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 ANXA2RQ3ZCQ2 193 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 IGLV3-9A0A075B6K5 115 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 IGKV1-39P01597 117 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 IGKV1D-39P04432 117 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 HOXD3P31249 432 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-227ENST00000530748 MRPL51Q4U2R6 128 aaKnown RBP6.76□□□□□ -1.33
CTNND1-227ENST00000530748 PIP4P1Q86T03 277 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
CTNND1-227ENST00000530748 SRSF2Q01130 221 aaKnown RBP6.76□□□□□ -1.33
CTNND1-227ENST00000530748 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
CTNND1-227ENST00000530748 RP1L1Q8IWN7 2480 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-227ENST00000530748 TCTEX1D4Q5JR98 221 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 KNCNA6PVL3 124 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 CD5LO43866 347 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 NBL1P41271 181 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 MPV17L2Q567V2 206 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 OR11H6Q8NGC7 330 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 IGLV3-1P01715 115 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 CYYR1Q96J86 154 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 C1orf147Q96MC9 270 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-227ENST00000530748 TMEM243Q9BU79 118 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 FAM215AQ9Y5M1 114 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 V9GYV3 84 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 TRAV26-2A0A0B4J265 109 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 WISP1O95388 367 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE2AQ6NT46 116 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 C18orf32Q8TCD1 76 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 CACNA1CQ13936 2221 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 C2orf66Q6UXQ4 117 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 PRSS33Q8NF86 280 aa6.75□□□□□ -1.33
CTNND1-227ENST00000530748 SHISA9B4DS77 424 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 ZNF114Q8NC26 417 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 PRR25Q96S07 402 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 TRAV12-2A0A075B6T6 113 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE7O76087 117 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 IGHV2-5P01817 119 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 IGHV2-70P01814 119 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 ELANEP08246 267 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 KAAG1Q9UBP8 84 aa6.74□□□□□ -1.33
CTNND1-227ENST00000530748 POLR3KQ9Y2Y1 108 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-227ENST00000530748 PTPRDP23468 1912 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 536.2 ms