RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 PSG9Q00887 426 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 SUN5Q8TC36 379 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 RPUSD4Q96CM3 377 aaKnown RBP15.65■□□□□ 0.1
CAPN1-220ENST00000530567 CLEC5AQ9NY25 188 aa15.65■□□□□ 0.1
CAPN1-220ENST00000530567 GIG44P09565 113 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-220ENST00000530567 ZNF705DP0CH99 300 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-220ENST00000530567 ZNF705BP0CI00 300 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-220ENST00000530567 C4BPBP20851 252 aa15.64■□□□□ 0.09
CAPN1-220ENST00000530567 EBLN2Q6P2I7 272 aa15.64■□□□□ 0.09
CAPN1-220ENST00000530567 MRPL53Q96EL3 112 aaKnown RBP15.64■□□□□ 0.09
CAPN1-220ENST00000530567 CXorf1O96002 111 aa15.63■□□□□ 0.09
CAPN1-220ENST00000530567 OR8A1Q8NGG7 326 aa15.63■□□□□ 0.09
CAPN1-220ENST00000530567 CLUHP3Q96NS8 147 aa15.63■□□□□ 0.09
CAPN1-220ENST00000530567 CSTL1Q9H114 145 aa15.63■□□□□ 0.09
CAPN1-220ENST00000530567 TGP01266 2768 aa15.63■□□□□ 0.09
CAPN1-220ENST00000530567 TENM3Q9P273 2699 aa15.63■□□□□ 0.09
CAPN1-220ENST00000530567 ICAM4Q14773 271 aa15.62■□□□□ 0.09
CAPN1-220ENST00000530567 FAM213BQ8TBF2 198 aa15.62■□□□□ 0.09
CAPN1-220ENST00000530567 Q9H3A6 140 aa15.62■□□□□ 0.09
CAPN1-220ENST00000530567 RETNQ9HD89 108 aa15.62■□□□□ 0.09
CAPN1-220ENST00000530567 NBEAL2Q6ZNJ1 2754 aa15.62■□□□□ 0.09
CAPN1-220ENST00000530567 MAP1LC3B2A6NCE7 125 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 BOLA2-SMG1P6H3BVE0 249 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 IGKV3-20P01619 116 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 NHLRC4P0CG21 123 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-220ENST00000530567 CNN1P51911 297 aaKnown RBP15.61■□□□□ 0.09
CAPN1-220ENST00000530567 FGF8P55075 233 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-220ENST00000530567 RANP62826 216 aaKnown RBP15.61■□□□□ 0.09
CAPN1-220ENST00000530567 EIF5AL1Q6IS14 154 aaKnown RBP15.61■□□□□ 0.09
CAPN1-220ENST00000530567 AMTNQ6UX39 209 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 DPPA3Q6W0C5 159 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 LYPD1Q8N2G4 141 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 MAP1LC3BQ9GZQ8 125 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 AAMDCQ9H7C9 122 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 PRELID1Q9Y255 219 aa15.61■□□□□ 0.09
CAPN1-220ENST00000530567 UBE2CO00762 179 aa15.6■□□□□ 0.09
CAPN1-220ENST00000530567 OR4B1Q8NGF8 309 aa15.6■□□□□ 0.09
CAPN1-220ENST00000530567 CA1P00915 261 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-220ENST00000530567 HIST1H1AQ02539 215 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-220ENST00000530567 MORN3Q6PF18 240 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-220ENST00000530567 MBD3L1Q8WWY6 194 aa15.6■□□□□ 0.09
CAPN1-220ENST00000530567 TMPRSS5Q9H3S3 457 aa15.6■□□□□ 0.09
CAPN1-220ENST00000530567 TMEM167BQ9NRX6 74 aa15.6■□□□□ 0.09
CAPN1-220ENST00000530567 DUSP14O95147 198 aaKnown RBP15.59■□□□□ 0.09
CAPN1-220ENST00000530567 SULT1A2P50226 295 aa15.59■□□□□ 0.09
CAPN1-220ENST00000530567 DEFB135Q30KP9 77 aa15.59■□□□□ 0.09
CAPN1-220ENST00000530567 Q6ZWC4 215 aa15.59■□□□□ 0.09
CAPN1-220ENST00000530567 SPATA25Q9BR10 227 aa15.59■□□□□ 0.09
CAPN1-220ENST00000530567 SLC35B3Q9H1N7 401 aa15.59■□□□□ 0.09
CAPN1-220ENST00000530567 OTORQ9NRC9 128 aa15.59■□□□□ 0.09
CAPN1-220ENST00000530567 RAB5CP51148 216 aa15.58■□□□□ 0.08
CAPN1-220ENST00000530567 FAM74A1Q5RGS3 127 aa15.58■□□□□ 0.08
CAPN1-220ENST00000530567 IQCF2Q8IXL9 164 aa15.57■□□□□ 0.08
CAPN1-220ENST00000530567 OVOL2Q9BRP0 275 aa15.57■□□□□ 0.08
CAPN1-220ENST00000530567 PGPA6NDG6 321 aa15.56■□□□□ 0.08
CAPN1-220ENST00000530567 NPIPB6E9PJ23 425 aa15.56■□□□□ 0.08
CAPN1-220ENST00000530567 FXYD7P58549 80 aa15.56■□□□□ 0.08
CAPN1-220ENST00000530567 SFT2D1Q8WV19 159 aa15.56■□□□□ 0.08
CAPN1-220ENST00000530567 ZMAT4Q9H898 229 aa15.56■□□□□ 0.08
CAPN1-220ENST00000530567 IGKV2-40A0A087WW87 121 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-220ENST00000530567 GGTLC3B5MD39 225 aa15.55■□□□□ 0.08
CAPN1-220ENST00000530567 IGKV2D-40P01614 121 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-220ENST00000530567 NUTF2P61970 127 aaKnown RBP15.55■□□□□ 0.08
CAPN1-220ENST00000530567 ALKAL2Q6UX46 152 aa15.55■□□□□ 0.08
CAPN1-220ENST00000530567 CSNK1G2-AS1Q8NCQ2 148 aa15.55■□□□□ 0.08
CAPN1-220ENST00000530567 OR10J6PQ8NGY7 276 aa15.55■□□□□ 0.08
CAPN1-220ENST00000530567 RNF183Q96D59 192 aa15.55■□□□□ 0.08
CAPN1-220ENST00000530567 TP53TG1Q9Y2A0 90 aa15.55■□□□□ 0.08
CAPN1-220ENST00000530567 YTHDF2Q9Y5A9 579 aaKnown RBP15.55■□□□□ 0.08
CAPN1-220ENST00000530567 H2AFB1P0C5Y9 115 aa15.54■□□□□ 0.08
CAPN1-220ENST00000530567 RCHY1Q96PM5 261 aa15.54■□□□□ 0.08
CAPN1-220ENST00000530567 XCL2Q9UBD3 114 aa15.54■□□□□ 0.08
CAPN1-220ENST00000530567 ERCC8Q13216 396 aa15.53■□□□□ 0.08
CAPN1-220ENST00000530567 STAB2Q8WWQ8 2551 aa15.53■□□□□ 0.08
CAPN1-220ENST00000530567 A0A1B0GV50 99 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 A0A1W2PRE2 83 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 DIRC3C9JPN6 131 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 SPRY2O43597 315 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 CT45A10P0DMU9 189 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 SPINK13Q1W4C9 94 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 RXFP4Q8TDU9 374 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 VGLL1Q99990 258 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 AGPAT4-IT1Q9H0P7 198 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 U3KQK5 164 aa15.52■□□□□ 0.08
CAPN1-220ENST00000530567 TRAV1-1A0A0B4J248 108 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 FAM74A7A6NL05 159 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 M0R2Z0 102 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 CRXO43186 299 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-220ENST00000530567 CSN1S1P47710 185 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 UBE2G2P60604 165 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 GNG5P63218 68 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 C9orf47Q6ZRZ4 202 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 ARL6IP6Q8N6S5 226 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 C1QTNF4Q9BXJ3 329 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 SUMO1P63165 101 aaKnown RBP15.51■□□□□ 0.07
CAPN1-220ENST00000530567 C5orf17Q8NAS9 161 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 CMTM2Q8TAZ6 248 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 ODF3Q96PU9 254 aa15.51■□□□□ 0.07
CAPN1-220ENST00000530567 RBAKDNA6NC62 111 aa15.5■□□□□ 0.07
CAPN1-220ENST00000530567 SLC25A5P05141 298 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms