RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SMLR1H3BR10 107 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 M0R2Z0 102 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 CRXO43186 299 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 OR7C2O60412 319 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 TAS2R45P59539 299 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 C1orf158Q8N1D5 194 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 C11orf45Q8TAV5 145 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 IGF2BP2-AS1Q96M15 143 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 PSMG3Q9BT73 122 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 PPP1R14DQ9NXH3 145 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 PRELID1Q9Y255 219 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 GOLT1BQ9Y3E0 138 aa9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 KMT2CQ8NEZ4 4911 aaKnown RBP9.15□□□□□ -0.94
CCDC90B-216ENST00000529856 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 BORCS7-ASMTA0A0B4J1R7 106 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 A0A1W2PPV4 95 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 BOLA2-SMG1P6H3BVE0 249 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 M0R3E3 92 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 ARPC5O15511 151 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 OR10J4P0C629 311 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 RAB2AP61019 212 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 SERF2P84101 59 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 RPL7L1Q6DKI1 246 aaKnown RBP9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 EXOC3-AS1Q8N2X6 119 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 AAMDCQ9H7C9 122 aa9.14□□□□□ -0.95
CCDC90B-216ENST00000529856 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 TAAR5O14804 337 aa9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 EIF3GO75821 320 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 NANOS2P60321 138 aaKnown RBP9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 PMS2P11Q13670 270 aa9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 ICAM4Q14773 271 aa9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
CCDC90B-216ENST00000529856 TRAV12-2A0A075B6T6 113 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 NPIPB6E9PJ23 425 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 INSP01308 110 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 MBP02144 154 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 CDKN1BP46527 198 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 UBE2L3P68036 154 aaKnown RBP9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 Q6ZNX1 250 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 OR11H4Q8NGC9 324 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 GNPNAT1Q96EK6 184 aaPredicted RBP9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 SH3BGRL3Q9H299 93 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
CCDC90B-216ENST00000529856 TMEM189A5PLL7 270 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 HMSDA8MTL9 139 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 JTBO76095 146 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 CT45A10P0DMU9 189 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 TSPOP30536 169 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 RANP62826 216 aaKnown RBP9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 PHLDA1Q8WV24 401 aaPredicted RBP9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 ODF3Q96PU9 254 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 TMEM208Q9BTX3 173 aa9.11□□□□□ -0.95
CCDC90B-216ENST00000529856 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 HBE1P02100 147 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 STAG3L2P0CL84 134 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 STAG3L3P0CL85 134 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 CDC34P49427 236 aaPredicted RBP9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 ERCC8Q13216 396 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 ZNF345Q14585 488 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 RRN3P1Q2M238 152 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 KCNRGQ8N5I3 272 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 RAB24Q969Q5 203 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 Q9H3A6 140 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
CCDC90B-216ENST00000529856 PRM2P04554 102 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 LEPP41159 167 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 KIR3DS1Q14943 382 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 PLECQ15149 4684 aaKnown RBP9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 TMEM256Q8N2U0 113 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 LINC01587Q99440 93 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 ACTR3CQ9C0K3 210 aaPredicted RBP9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
CCDC90B-216ENST00000529856 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 A0A0D9SG52 128 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 LOC102723971A0A1B0GUV8 181 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 PGPA6NDG6 321 aa9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 ZNF705GA8MUZ8 300 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
CCDC90B-216ENST00000529856 ARL14EPLP0DKL9 152 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms