RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 HLA-DRB4X5D2U9 266 aa10.31□□□□□ -0.76
USF1-209ENST00000529476 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 A0A0J9YX75 114 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 MAP1LC3B2A6NCE7 125 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 M0R3E3 92 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 CXorf1O96002 111 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 FGF8P55075 233 aaPredicted RBP10.3□□□□□ -0.76
USF1-209ENST00000529476 RANP62826 216 aaKnown RBP10.3□□□□□ -0.76
USF1-209ENST00000529476 ICAM4Q14773 271 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 EIF5AL1Q6IS14 154 aaKnown RBP10.3□□□□□ -0.76
USF1-209ENST00000529476 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 MAP1LC3BQ9GZQ8 125 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
USF1-209ENST00000529476 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 APOC4P55056 127 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 DPPA3Q6W0C5 159 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 IQCF2Q8IXL9 164 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 OR4B1Q8NGF8 309 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 Q9H3A6 140 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 TMPRSS5Q9H3S3 457 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 AAMDCQ9H7C9 122 aa10.29□□□□□ -0.76
USF1-209ENST00000529476 KIR2DL5BA0A0G2JN68 375 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 KIR2DL5BA0A0G2JPC4 375 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 HIST1H1AQ02539 215 aaPredicted RBP10.28□□□□□ -0.76
USF1-209ENST00000529476 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 KIR2DL5AQ8N109 375 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 OR8A1Q8NGG7 326 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 KIR2DL5BQ8NHK3 375 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 SUN5Q8TC36 379 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 MRPL53Q96EL3 112 aaKnown RBP10.28□□□□□ -0.76
USF1-209ENST00000529476 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 TMEM167BQ9NRX6 74 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 PRELID1Q9Y255 219 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 COL7A1Q02388 2944 aa10.28□□□□□ -0.76
USF1-209ENST00000529476 SULT1A2P50226 295 aa10.27□□□□□ -0.77
USF1-209ENST00000529476 CNN1P51911 297 aaKnown RBP10.27□□□□□ -0.77
USF1-209ENST00000529476 LYPD1Q8N2G4 141 aa10.27□□□□□ -0.77
USF1-209ENST00000529476 SFT2D1Q8WV19 159 aa10.27□□□□□ -0.77
USF1-209ENST00000529476 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
USF1-209ENST00000529476 RETNQ9HD89 108 aa10.27□□□□□ -0.77
USF1-209ENST00000529476 RYR2Q92736 4967 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 A0A1B0GV50 99 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 PGPA6NDG6 321 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 DUSP14O95147 198 aaKnown RBP10.26□□□□□ -0.77
USF1-209ENST00000529476 GIG44P09565 113 aaPredicted RBP10.26□□□□□ -0.77
USF1-209ENST00000529476 RAB5CP51148 216 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 FXYD7P58549 80 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 ALKAL2Q6UX46 152 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 CLUHP3Q96NS8 147 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 TM2D3Q9BRN9 247 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
USF1-209ENST00000529476 A8MTW9 85 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 UBE2CO00762 179 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 CA1P00915 261 aaPredicted RBP10.25□□□□□ -0.77
USF1-209ENST00000529476 H2AFB1P0C5Y9 115 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 UBE2G2P60604 165 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 DEFB135Q30KP9 77 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 MORN3Q6PF18 240 aaPredicted RBP10.25□□□□□ -0.77
USF1-209ENST00000529476 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 OR10J6PQ8NGY7 276 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 WWC2-AS2Q96NR7 200 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
USF1-209ENST00000529476 IGKV2-40A0A087WW87 121 aaPredicted RBP10.24□□□□□ -0.77
USF1-209ENST00000529476 IGKV2D-40P01614 121 aaPredicted RBP10.24□□□□□ -0.77
USF1-209ENST00000529476 NHLRC4P0CG21 123 aaPredicted RBP10.24□□□□□ -0.77
USF1-209ENST00000529476 NUTF2P61970 127 aaKnown RBP10.24□□□□□ -0.77
USF1-209ENST00000529476 ERCC8Q13216 396 aa10.24□□□□□ -0.77
USF1-209ENST00000529476 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
USF1-209ENST00000529476 YTHDF2Q9Y5A9 579 aaKnown RBP10.24□□□□□ -0.77
USF1-209ENST00000529476 GGTLC3B5MD39 225 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 NPIPB6E9PJ23 425 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 CSN1S1P47710 185 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 GNG5P63218 68 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 Q6ZWC4 215 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 CMTM2Q8TAZ6 248 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 RXFP4Q8TDU9 374 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 RPH3ALQ9UNE2 315 aa10.23□□□□□ -0.77
USF1-209ENST00000529476 A0A1W2PRE2 83 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 ZNF705EA8MWA4 302 aaPredicted RBP10.22□□□□□ -0.77
USF1-209ENST00000529476 DIRC3C9JPN6 131 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 M0R2Z0 102 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 SLC25A5P05141 298 aaKnown RBP10.22□□□□□ -0.77
USF1-209ENST00000529476 SUMO1P63165 101 aaKnown RBP10.22□□□□□ -0.77
USF1-209ENST00000529476 CCL20P78556 96 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 VGLL1Q99990 258 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 OVOL2Q9BRP0 275 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 AGPAT4-IT1Q9H0P7 198 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 PPP1R14DQ9NXH3 145 aa10.22□□□□□ -0.77
USF1-209ENST00000529476 TRAV1-1A0A0B4J248 108 aa10.21□□□□□ -0.77
USF1-209ENST00000529476 SPRY2O43597 315 aa10.21□□□□□ -0.77
USF1-209ENST00000529476 CT45A10P0DMU9 189 aa10.21□□□□□ -0.77
USF1-209ENST00000529476 C9orf47Q6ZRZ4 202 aa10.21□□□□□ -0.77
USF1-209ENST00000529476 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.77
USF1-209ENST00000529476 RNF183Q96D59 192 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms