RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 SPATA25Q9BR10 227 aa18.34■□□□□ 0.53
LTBP3-213ENST00000529371 IGKV3-20P01619 116 aa18.33■□□□□ 0.52
LTBP3-213ENST00000529371 GCHFRP30047 84 aa18.33■□□□□ 0.52
LTBP3-213ENST00000529371 HIST1H1AQ02539 215 aaPredicted RBP18.33■□□□□ 0.52
LTBP3-213ENST00000529371 FAM213BQ8TBF2 198 aa18.33■□□□□ 0.52
LTBP3-213ENST00000529371 MRPL53Q96EL3 112 aaKnown RBP18.33■□□□□ 0.52
LTBP3-213ENST00000529371 TMEM167BQ9NRX6 74 aa18.33■□□□□ 0.52
LTBP3-213ENST00000529371 CA1P00915 261 aaPredicted RBP18.32■□□□□ 0.52
LTBP3-213ENST00000529371 RANP62826 216 aaKnown RBP18.32■□□□□ 0.52
LTBP3-213ENST00000529371 ICAM4Q14773 271 aa18.32■□□□□ 0.52
LTBP3-213ENST00000529371 ZNF726P1Q15940 193 aa18.32■□□□□ 0.52
LTBP3-213ENST00000529371 DPPA3Q6W0C5 159 aa18.32■□□□□ 0.52
LTBP3-213ENST00000529371 LYPD1Q8N2G4 141 aa18.32■□□□□ 0.52
LTBP3-213ENST00000529371 EXOC3-AS1Q8N2X6 119 aa18.32■□□□□ 0.52
LTBP3-213ENST00000529371 OR8A1Q8NGG7 326 aa18.32■□□□□ 0.52
LTBP3-213ENST00000529371 MAP1LC3B2A6NCE7 125 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 FAM74A1Q5RGS3 127 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 SSX7Q7RTT5 188 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 OR10J6PQ8NGY7 276 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 TM2D3Q9BRN9 247 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 MAP1LC3BQ9GZQ8 125 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 Q9H3A6 140 aa18.31■□□□□ 0.52
LTBP3-213ENST00000529371 ZNF705FA8MVS1 300 aaPredicted RBP18.3■□□□□ 0.52
LTBP3-213ENST00000529371 CSN1S1P47710 185 aa18.3■□□□□ 0.52
LTBP3-213ENST00000529371 CNN1P51911 297 aaKnown RBP18.3■□□□□ 0.52
LTBP3-213ENST00000529371 PPP1R14DQ9NXH3 145 aa18.3■□□□□ 0.52
LTBP3-213ENST00000529371 M0R3E3 92 aa18.29■□□□□ 0.52
LTBP3-213ENST00000529371 RAB5CP51148 216 aa18.29■□□□□ 0.52
LTBP3-213ENST00000529371 Q6ZWC4 215 aa18.29■□□□□ 0.52
LTBP3-213ENST00000529371 CLUHP3Q96NS8 147 aa18.29■□□□□ 0.52
LTBP3-213ENST00000529371 AGRNO00468 2067 aa18.29■□□□□ 0.52
LTBP3-213ENST00000529371 ZNF705DP0CH99 300 aaPredicted RBP18.28■□□□□ 0.52
LTBP3-213ENST00000529371 ZNF705BP0CI00 300 aaPredicted RBP18.28■□□□□ 0.52
LTBP3-213ENST00000529371 FGF8P55075 233 aaPredicted RBP18.28■□□□□ 0.52
LTBP3-213ENST00000529371 DEFB135Q30KP9 77 aa18.28■□□□□ 0.52
LTBP3-213ENST00000529371 C1QTNF4Q9BXJ3 329 aa18.28■□□□□ 0.52
LTBP3-213ENST00000529371 OTORQ9NRC9 128 aa18.28■□□□□ 0.52
LTBP3-213ENST00000529371 PRB4P10163 310 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-213ENST00000529371 FHITP49789 147 aa18.27■□□□□ 0.52
LTBP3-213ENST00000529371 CMTM2Q8TAZ6 248 aa18.27■□□□□ 0.52
LTBP3-213ENST00000529371 RCHY1Q96PM5 261 aa18.27■□□□□ 0.52
LTBP3-213ENST00000529371 PLA2G2EQ9NZK7 142 aa18.27■□□□□ 0.52
LTBP3-213ENST00000529371 RXFP4Q8TDU9 374 aa18.26■□□□□ 0.51
LTBP3-213ENST00000529371 SFT2D1Q8WV19 159 aa18.26■□□□□ 0.51
LTBP3-213ENST00000529371 RETNQ9HD89 108 aa18.26■□□□□ 0.51
LTBP3-213ENST00000529371 PRAC2D3DTV9 90 aa18.25■□□□□ 0.51
LTBP3-213ENST00000529371 TP53TG1Q9Y2A0 90 aa18.25■□□□□ 0.51
LTBP3-213ENST00000529371 BOLA1Q9Y3E2 137 aa18.25■□□□□ 0.51
LTBP3-213ENST00000529371 PGPA6NDG6 321 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 SPRY2O43597 315 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 H2AFB1P0C5Y9 115 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 SULT1A2P50226 295 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 FXYD7P58549 80 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 SUN5Q8TC36 379 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 U3KQK5 164 aa18.24■□□□□ 0.51
LTBP3-213ENST00000529371 A8MTW9 85 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 BOLA2-SMG1P6H3BVE0 249 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 AMBPP02760 352 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 MBD3L1Q8WWY6 194 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 SLC35B3Q9H1N7 401 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 XCL2Q9UBD3 114 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 RPH3ALQ9UNE2 315 aa18.23■□□□□ 0.51
LTBP3-213ENST00000529371 TEX46H3BTG2 121 aa18.22■□□□□ 0.51
LTBP3-213ENST00000529371 SLC25A5P05141 298 aaKnown RBP18.22■□□□□ 0.51
LTBP3-213ENST00000529371 RNF183Q96D59 192 aa18.22■□□□□ 0.51
LTBP3-213ENST00000529371 TMPRSS5Q9H3S3 457 aa18.22■□□□□ 0.51
LTBP3-213ENST00000529371 PRKDCP78527 4128 aaKnown RBP18.21■□□□□ 0.51
LTBP3-213ENST00000529371 IGKV2-40A0A087WW87 121 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-213ENST00000529371 A0A1B0GV50 99 aa18.21■□□□□ 0.51
LTBP3-213ENST00000529371 NPIPB6E9PJ23 425 aa18.21■□□□□ 0.51
LTBP3-213ENST00000529371 IGKV2D-40P01614 121 aaPredicted RBP18.21■□□□□ 0.51
LTBP3-213ENST00000529371 AMTNQ6UX39 209 aa18.21■□□□□ 0.51
LTBP3-213ENST00000529371 A0A1W2PRE2 83 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 TSPOP30536 169 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 UBE2G2P60604 165 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 SPINK13Q1W4C9 94 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 TMEM78Q5T7P6 136 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 ALKAL2Q6UX46 152 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 OVOL2Q9BRP0 275 aa18.2■□□□□ 0.5
LTBP3-213ENST00000529371 HBE1P02100 147 aa18.19■□□□□ 0.5
LTBP3-213ENST00000529371 GIG44P09565 113 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-213ENST00000529371 C5orf17Q8NAS9 161 aa18.19■□□□□ 0.5
LTBP3-213ENST00000529371 LINC00477Q96M19 166 aa18.19■□□□□ 0.5
LTBP3-213ENST00000529371 RBAKDNA6NC62 111 aa18.18■□□□□ 0.5
LTBP3-213ENST00000529371 ZNF705EA8MWA4 302 aaPredicted RBP18.18■□□□□ 0.5
LTBP3-213ENST00000529371 DIRC3C9JPN6 131 aa18.18■□□□□ 0.5
LTBP3-213ENST00000529371 M0R2Z0 102 aa18.18■□□□□ 0.5
LTBP3-213ENST00000529371 PPT1P50897 306 aa18.18■□□□□ 0.5
LTBP3-213ENST00000529371 SUMO1P63165 101 aaKnown RBP18.18■□□□□ 0.5
LTBP3-213ENST00000529371 ERCC8Q13216 396 aa18.18■□□□□ 0.5
LTBP3-213ENST00000529371 ARL6IP6Q8N6S5 226 aa18.18■□□□□ 0.5
LTBP3-213ENST00000529371 NKX6-2Q9C056 277 aaPredicted RBP18.18■□□□□ 0.5
LTBP3-213ENST00000529371 INSP01308 110 aa18.17■□□□□ 0.5
LTBP3-213ENST00000529371 LEPP41159 167 aa18.17■□□□□ 0.5
LTBP3-213ENST00000529371 C9orf47Q6ZRZ4 202 aa18.17■□□□□ 0.5
LTBP3-213ENST00000529371 ODF3Q96PU9 254 aa18.17■□□□□ 0.5
LTBP3-213ENST00000529371 GGTLC3B5MD39 225 aa18.16■□□□□ 0.5
LTBP3-213ENST00000529371 K7EQM0 130 aa18.16■□□□□ 0.5
LTBP3-213ENST00000529371 CDKN1BP46527 198 aa18.16■□□□□ 0.5
LTBP3-213ENST00000529371 OR11H2Q8NH07 326 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms