RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 K7EPK0 472 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 SLC17A3O00476 420 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 CXCL2P19875 107 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 CAMLGP49069 296 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 RAB31Q13636 194 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 OPCMLQ14982 345 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 MORN5Q5VZ52 161 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 Q6ZRG5 221 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 ZNF575Q86XF7 245 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 ENKURQ8TC29 256 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 TMEM37Q8WXS4 190 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 GGACTQ9BVM4 153 aa9.13□□□□□ -0.95
CPSF1-204ENST00000529288 H7BYZ3 331 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 CCL18P55774 89 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 FAM3BP58499 235 aaPredicted RBP9.12□□□□□ -0.95
CPSF1-204ENST00000529288 S100A10P60903 97 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 MIC13Q5XKP0 118 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 MARVELD1Q9BSK0 173 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 DNAJC4Q9NNZ3 241 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 PKD1P98161 4303 aa9.12□□□□□ -0.95
CPSF1-204ENST00000529288 NBDYA0A0U1RRE5 68 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 GAGE12BA1L429 117 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 H3BQ15 152 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 GAGE7O76087 117 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 GAGE12FP0CL80 117 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 GAGE12GP0CL81 117 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 GAGE12IP0CL82 117 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 OR1L4Q8NGR5 311 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 TMEM263Q8WUH6 116 aaKnown RBP9.11□□□□□ -0.95
CPSF1-204ENST00000529288 UQCC1Q9NVA1 299 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 PXMP4Q9Y6I8 212 aa9.11□□□□□ -0.95
CPSF1-204ENST00000529288 PKHD1P08F94 4074 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 A0A0J9YY99 117 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 UBE2L5PA0A1B0GUS4 154 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 SNURFLB1AK76 121 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
CPSF1-204ENST00000529288 BAXQ07812 192 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
CPSF1-204ENST00000529288 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 LINC00588Q9Y4M8 146 aa9.1□□□□□ -0.95
CPSF1-204ENST00000529288 TRAV26-1A0A087WT03 109 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 RLN2P04090 185 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 CT45A10P0DMU9 189 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 IGLC2P0DOY2 106 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 LEPP41159 167 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 TNP2Q05952 138 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 C6orf223Q8N319 242 aa9.09□□□□□ -0.95
CPSF1-204ENST00000529288 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
CPSF1-204ENST00000529288 PCLOQ9Y6V0 5065 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 PRAF2O60831 178 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 FGF7P21781 194 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 ERCC8Q13216 396 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 SAT2Q96F10 170 aaPredicted RBP9.08□□□□□ -0.96
CPSF1-204ENST00000529288 PFDN5Q99471 154 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 C20orf144Q9BQM9 153 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 SLC39A9Q9NUM3 307 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 ZNF586Q9NXT0 402 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 WDR83OSQ9Y284 106 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 TIMM9Q9Y5J7 89 aa9.08□□□□□ -0.96
CPSF1-204ENST00000529288 IGSF23A1L1A6 192 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 C16orf90A8MZG2 172 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 SIX6O95475 246 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 S100A11P31949 105 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 SULT1A1P50225 295 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 DEFA1P59665 94 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 DEFA3P59666 94 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 RAB32Q13637 225 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 GUK1Q16774 197 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 STX12Q86Y82 276 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 BLNKQ8WV28 456 aa9.07□□□□□ -0.96
CPSF1-204ENST00000529288 GPN1Q9HCN4 374 aaPredicted RBP9.07□□□□□ -0.96
CPSF1-204ENST00000529288 NPIPB6E9PJ23 425 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 M0R3E3 92 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 M6PRP20645 277 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 HOXA5P20719 270 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 RPL29P47914 159 aaKnown RBP9.06□□□□□ -0.96
CPSF1-204ENST00000529288 H2BFSP57053 126 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 HBG1P69891 147 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 HBG2P69892 147 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 TMEM252Q8N6L7 170 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 Q9H8V8 135 aa9.06□□□□□ -0.96
CPSF1-204ENST00000529288 H0YIZ8 118 aa9.05□□□□□ -0.96
CPSF1-204ENST00000529288 PYYP10082 97 aa9.05□□□□□ -0.96
CPSF1-204ENST00000529288 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
CPSF1-204ENST00000529288 RXFP4Q8TDU9 374 aa9.05□□□□□ -0.96
CPSF1-204ENST00000529288 LYRM2Q9NU23 88 aaPredicted RBP9.05□□□□□ -0.96
CPSF1-204ENST00000529288 TRBV19A0A075B6N1 114 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 C7orf71A4D174 169 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 BTN1A1Q13410 526 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 ATP6V1FQ16864 119 aa9.04□□□□□ -0.96
CPSF1-204ENST00000529288 VWC2Q2TAL6 325 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms