RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, human

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSF-206	ENST00000529199	UPK3B	Q9BT76	320 aa		13.77	□□□□□ -0.21
CTSF-206	ENST00000529199	TMPRSS5	Q9H3S3	457 aa		13.77	□□□□□ -0.21
CTSF-206	ENST00000529199	MRPS16	Q9Y3D3	137 aa	Known RBP	13.77	□□□□□ -0.21
CTSF-206	ENST00000529199	LINC00854	A0A1B0GVQ3	168 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199	NDUFB6	O95139	128 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199	LEP	P41159	167 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199	C4orf46	Q504U0	113 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199	C10orf113	Q5VZT2	155 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199	TMEM37	Q8WXS4	190 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199	PXMP4	Q9Y6I8	212 aa		13.76	□□□□□ -0.21
CTSF-206	ENST00000529199		A0A1W2PPQ1	181 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199	CCDC160	A6NGH7	325 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199		H3BQ15	152 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199	TSC22D2	O75157	780 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199	CT45A10	P0DMU9	189 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199	TAS2R30	P59541	319 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199	OPCML	Q14982	345 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199		Q6ZTI0	123 aa		13.75	□□□□□ -0.21
CTSF-206	ENST00000529199		H3BNG1	76 aa		13.74	□□□□□ -0.21
CTSF-206	ENST00000529199	BTF3	P20290	206 aa	Known RBP	13.74	□□□□□ -0.21
CTSF-206	ENST00000529199	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.74	□□□□□ -0.21
CTSF-206	ENST00000529199	ZNF431	Q8TF32	576 aa	Predicted RBP	13.74	□□□□□ -0.21
CTSF-206	ENST00000529199	MGST2	Q99735	147 aa		13.74	□□□□□ -0.21
CTSF-206	ENST00000529199	GGACT	Q9BVM4	153 aa		13.74	□□□□□ -0.21
CTSF-206	ENST00000529199	TRGV2	A0A075B6R0	118 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	TRAV5	A0A0B4J249	113 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	C7orf66	A4D0T2	115 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	NAP1L6	A6NFF2	107 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	IGLC2	P0DOY2	106 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	SPANXN2	Q5MJ10	180 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	TRIQK	Q629K1	86 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	SAT2	Q96F10	170 aa	Predicted RBP	13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	PYGO2	Q9BRQ0	406 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	DNAJC4	Q9NNZ3	241 aa		13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	RCL1	Q9Y2P8	373 aa	Known RBP	13.73	□□□□□ -0.21
CTSF-206	ENST00000529199	DAZ2	Q13117	558 aa	Known RBP	13.72	□□□□□ -0.21
CTSF-206	ENST00000529199		Q6ZRG5	221 aa		13.72	□□□□□ -0.21
CTSF-206	ENST00000529199	SRR	Q9GZT4	340 aa		13.72	□□□□□ -0.21
CTSF-206	ENST00000529199	GSN-AS1	Q9NRJ2	163 aa		13.72	□□□□□ -0.21
CTSF-206	ENST00000529199		A0A096LPF7	62 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	NPIPB6	E9PJ23	425 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199		L7N2F9	121 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	MBP	P02686	304 aa	Predicted RBP	13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	CAMLG	P49069	296 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	BCAP31	P51572	246 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	LINC00315	P59091	139 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	VAMP2	P63027	116 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	RAB31	Q13636	194 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	BAK1	Q16611	211 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	VSIG2	Q96IQ7	327 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	HERC1	Q15751	4861 aa		13.71	□□□□□ -0.21
CTSF-206	ENST00000529199	GUK1	Q16774	197 aa		13.7	□□□□□ -0.22
CTSF-206	ENST00000529199	MIC13	Q5XKP0	118 aa		13.7	□□□□□ -0.22
CTSF-206	ENST00000529199	NRARP	Q7Z6K4	114 aa		13.7	□□□□□ -0.22
CTSF-206	ENST00000529199	ODF3	Q96PU9	254 aa		13.7	□□□□□ -0.22
CTSF-206	ENST00000529199	TRGV1	A0A0A0MS02	117 aa		13.69	□□□□□ -0.22
CTSF-206	ENST00000529199	ERCC8	Q13216	396 aa		13.69	□□□□□ -0.22
CTSF-206	ENST00000529199	C7orf71	A4D174	169 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	CENPX	A8MT69	81 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	CCS	O14618	274 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	SIVA1	O15304	175 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	CST7	O76096	145 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	SLC25A5	P05141	298 aa	Known RBP	13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	FUS	P35637	526 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	ZNF846	Q147U1	533 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	OR1L4	Q8NGR5	311 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	FUT9	Q9Y231	359 aa		13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	LSM5	Q9Y4Y9	91 aa	Known RBP	13.68	□□□□□ -0.22
CTSF-206	ENST00000529199	FAM25E	A8MYX2	175 aa		13.67	□□□□□ -0.22
CTSF-206	ENST00000529199	EPM2A	B3EWF7	344 aa		13.67	□□□□□ -0.22
CTSF-206	ENST00000529199		M0R3E3	92 aa		13.67	□□□□□ -0.22
CTSF-206	ENST00000529199	RNASE4	P34096	147 aa	Known RBP	13.67	□□□□□ -0.22
CTSF-206	ENST00000529199	CAV2	P51636	162 aa		13.67	□□□□□ -0.22
CTSF-206	ENST00000529199	ZNF680	Q8NEM1	530 aa		13.67	□□□□□ -0.22
CTSF-206	ENST00000529199	MITD1	Q8WV92	249 aa		13.67	□□□□□ -0.22
CTSF-206	ENST00000529199	CD300C	Q08708	224 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	BTN1A1	Q13410	526 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	C11orf72	Q8NBR9	251 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	PFDN5	Q99471	154 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	UQCC1	Q9NVA1	299 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	PGPEP1	Q9NXJ5	209 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	KLF12	Q9Y4X4	402 aa		13.66	□□□□□ -0.22
CTSF-206	ENST00000529199	EREG	O14944	169 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	PAX4	O43316	350 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	NXPH4	O95158	308 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	IGHV3-53	P01767	116 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	EIF4E3	Q8N5X7	224 aa	Known RBP	13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	PTTG2	Q9NZH5	202 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	TIMM9	Q9Y5J7	89 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	TNFRSF18	Q9Y5U5	241 aa		13.65	□□□□□ -0.22
CTSF-206	ENST00000529199	TRBV19	A0A075B6N1	114 aa		13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	FAM24A	A6NFZ4	105 aa		13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	ZNF253	O75346	499 aa		13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	ZNF324	O75467	553 aa	Predicted RBP	13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	GPX1	P07203	203 aa		13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	BTC	P35070	178 aa		13.64	□□□□□ -0.23
CTSF-206	ENST00000529199		Q6ZRN7	208 aa	Predicted RBP	13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	MRPL53	Q96EL3	112 aa	Known RBP	13.64	□□□□□ -0.23
CTSF-206	ENST00000529199	AGPAT4-IT1	Q9H0P7	198 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms