RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 LINC00311Q8N616 119 aa7.14□□□□□ -1.27
CAPRIN1-206ENST00000528948 NGBQ9NPG2 151 aa7.14□□□□□ -1.27
CAPRIN1-206ENST00000528948 RTTNQ86VV8 2226 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 CNIH1O95406 144 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 IGKV3-15P01624 115 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 RBP4P02753 201 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 ACYP1P07311 99 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 LGALS1P09382 135 aaKnown RBP7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 IGLC6P0CF74 106 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 P0DMU3 169 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 FAM231AP0DMU4 169 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 FAM231CP0DMU5 169 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 LINC00205P59089 165 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 C3orf36Q3SXR2 165 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 AMTNQ6UX39 209 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 NFE4Q86UQ8 179 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 RLN3Q8WXF3 142 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 C18orf15Q96N68 181 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 SHANK2-AS3Q9BTD1 123 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 FSCN3Q9NQT6 498 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 HIF1ANQ9NWT6 349 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 TMEM160Q9NX00 188 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 ONECUT1Q9UBC0 465 aa7.13□□□□□ -1.27
CAPRIN1-206ENST00000528948 DYSFO75923 2080 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 IGKV1D-17A0A075B6S4 117 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 A0A1B0GX51 115 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 PRRG2O14669 202 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 RFPL3SP0C7P2 107 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 INSL3P51460 131 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 HOXA4Q00056 320 aaPredicted RBP7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 LOXL1Q08397 574 aaPredicted RBP7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 SRSF9Q13242 221 aaKnown RBP eCLIP7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 LRRC75A-AS1Q8N1F1 130 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 C10orf126Q8N4M7 172 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 PTH2Q96A98 100 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 MRPL20Q9BYC9 149 aaKnown RBP7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 ZNF407Q9C0G0 2248 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 ESPL1Q14674 2120 aa7.12□□□□□ -1.27
CAPRIN1-206ENST00000528948 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 TRAV8-4A0A0B4J246 113 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 TRAV40A0A0B4J280 105 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 H3BRN7 92 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 NHLRC4P0CG21 123 aaPredicted RBP7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 ATXN8Q156A1 80 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 MLANAQ16655 118 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 TMEM78Q5T7P6 136 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 SIGLEC15Q6ZMC9 328 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 ZNF826PQ6ZT77 177 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 Q71RC1 249 aaPredicted RBP7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 SLC25A45Q8N413 288 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 NRGNQ92686 78 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 RNF5Q99942 180 aa7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
CAPRIN1-206ENST00000528948 RBAKDNA6NC62 111 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 K7ESF4 209 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 KLK10O43240 276 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 SLC25A20O43772 301 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 SH2D1AO60880 128 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 LHBP01229 141 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 FAM106CPP0CH98 169 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 RPL27AP46776 148 aaKnown RBP7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 WT1-ASQ06250 92 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 FAM106AQ4KMX7 169 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 PRR31Q5SQ13 230 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 FAM53AQ6NSI3 398 aaPredicted RBP7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 Q6ZT83 130 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 IL17RELQ6ZVW7 336 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 ANKRD29Q8N6D5 301 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 CARD19Q96LW7 228 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 ASCL2Q99929 193 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 TPPP3Q9BW30 176 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 DKK4Q9UBT3 224 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 FZR1Q9UM11 496 aa7.1□□□□□ -1.27
CAPRIN1-206ENST00000528948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 A0A0B4J2C4 111 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 IGHV1-69DA0A0B4J2H0 117 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 H3BT86 120 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 RPL7P18124 248 aaKnown RBP7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 FOXG1P55316 489 aaPredicted RBP7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 LYZP61626 148 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 RPS28P62857 69 aaKnown RBP7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 SPRNQ5BIV9 151 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 NDUFA11Q86Y39 141 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 OR13C6PQ8NH95 151 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 SGK494Q96LW2 274 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 DCTN5Q9BTE1 182 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 RNF7Q9UBF6 113 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 PRO1854Q9UHT4 67 aa7.09□□□□□ -1.27
CAPRIN1-206ENST00000528948 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
CAPRIN1-206ENST00000528948 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
CAPRIN1-206ENST00000528948 IGHV3OR15-7A0A075B7D8 119 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms