RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 RPS10P5Q9NQ39 176 aa6.21□□□□□ -1.42
SSBP3-212ENST00000528930 IGKV1OR2-108A0A075B7D4 117 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 H0YIZ8 118 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 BUB3O43684 328 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 IL4P05112 153 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 RBMY1CP0DJD4 496 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 RD3LP0DJH9 198 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 DDTP30046 118 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 P2RY1P47900 373 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 PAX9P55771 341 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 CMC4P56277 68 aaPredicted RBP6.2□□□□□ -1.42
SSBP3-212ENST00000528930 RAB11AP62491 216 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 PAFAH1B2P68402 229 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 DLK1P80370 383 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 ZNF90Q03938 601 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 GUK1Q16774 197 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 PYY3Q5JQD4 70 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 C16orf54Q6UWD8 224 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 ZFP82Q8N141 532 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 GLMPQ8WWB7 406 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 CIB3Q96Q77 187 aaPredicted RBP6.2□□□□□ -1.42
SSBP3-212ENST00000528930 HRH4Q9H3N8 390 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 CBY1Q9Y3M2 126 aa6.2□□□□□ -1.42
SSBP3-212ENST00000528930 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
SSBP3-212ENST00000528930 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 BORCS7-ASMTA0A0B4J1R7 106 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 KIR2DL5BA0A0G2JN68 375 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 KIR2DL5BA0A0G2JPC4 375 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 C5orf51A6NDU8 294 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 PMS2P5A8MQ11 134 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 UMAD1C9J7I0 102 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 K7EQG2 157 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 IFNA21P01568 189 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 RPL35AP18077 110 aaKnown RBP6.19□□□□□ -1.42
SSBP3-212ENST00000528930 NKX2-1P43699 371 aaPredicted RBP6.19□□□□□ -1.42
SSBP3-212ENST00000528930 SULT1A1P50225 295 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 DEFB131AP59861 70 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 RPL11P62913 178 aaKnown RBP6.19□□□□□ -1.42
SSBP3-212ENST00000528930 AKR1C1Q04828 323 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 CLINT1Q14677 625 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 COA6Q5JTJ3 125 aaKnown RBP6.19□□□□□ -1.42
SSBP3-212ENST00000528930 SPANXN5Q5MJ07 72 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 Q6ZWC4 215 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 KIR2DL5AQ8N109 375 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 STPG3Q8N7X2 389 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 OR51G1Q8NGK1 321 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 KIR2DL5BQ8NHK3 375 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 DCANP1Q8TF63 244 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 RNF125Q96EQ8 232 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 SLC35E1Q96K37 410 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 TRGV9Q99603 122 aa6.19□□□□□ -1.42
SSBP3-212ENST00000528930 ACTR3CQ9C0K3 210 aaPredicted RBP6.19□□□□□ -1.42
SSBP3-212ENST00000528930 ZFP92A6NM28 416 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 C9JQL5 133 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 H3BP45 60 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 PPP1R2P9O14990 202 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 RTL8CO15255 209 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 APOC4P55056 127 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 RPP30P78346 268 aaKnown RBP6.18□□□□□ -1.42
SSBP3-212ENST00000528930 NHLH2Q02577 135 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 GAGE1Q13065 139 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 PMS2P11Q13670 270 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 IAH1Q2TAA2 248 aaPredicted RBP6.18□□□□□ -1.42
SSBP3-212ENST00000528930 LEMD1Q68G75 181 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 TMEM14EPQ6UXP3 125 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 DPPA3Q6W0C5 159 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 STXBP6Q8NFX7 210 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 RNF183Q96D59 192 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 GRAMD2BQ96HH9 432 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 PSENENQ9NZ42 101 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 RABAC1Q9UI14 185 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 TP53TG1Q9Y2A0 90 aa6.18□□□□□ -1.42
SSBP3-212ENST00000528930 KLK5Q9Y337 293 aaPredicted RBP6.18□□□□□ -1.42
SSBP3-212ENST00000528930 HELTA6NFD8 242 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 E5RGE8 158 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 SPRY2O43597 315 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 SSSCA1O60232 199 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 GCGP01275 180 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 FGF7P21781 194 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 PNRC1Q12796 327 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-212ENST00000528930 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-212ENST00000528930 DEFB135Q30KP9 77 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 SOHLH1Q5JUK2 328 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 OR8G2PQ6IF36 304 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 TMEM182Q6ZP80 229 aaPredicted RBP6.17□□□□□ -1.42
SSBP3-212ENST00000528930 Q6ZRG5 221 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 HIST3H2BBQ8N257 126 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 HSD17B11Q8NBQ5 300 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 NDUFAF3Q9BU61 184 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 CSTL1Q9H114 145 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 DOK5Q9P104 306 aa6.17□□□□□ -1.42
SSBP3-212ENST00000528930 RCL1Q9Y2P8 373 aaKnown RBP6.17□□□□□ -1.42
SSBP3-212ENST00000528930 AGRNO00468 2067 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 TRBV24-1A0A075B6N3 115 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 TRAV1-1A0A0B4J248 108 aa6.16□□□□□ -1.42
SSBP3-212ENST00000528930 IFITM10A6NMD0 228 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms