RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 KHDC3LQ587J8 217 aa12.67□□□□□ -0.38
CHRDL2-206ENST00000528789 PHYHIPLQ96FC7 376 aa12.67□□□□□ -0.38
CHRDL2-206ENST00000528789 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
CHRDL2-206ENST00000528789 X6R8D5 127 aa12.67□□□□□ -0.38
CHRDL2-206ENST00000528789 IGHV3OR16-12A0A075B7B8 117 aa12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 ZNF705EA8MWA4 302 aaPredicted RBP12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 PDE6HQ13956 83 aa12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 OR10J6PQ8NGY7 276 aa12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 ST6GAL2Q96JF0 529 aa12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
CHRDL2-206ENST00000528789 KMT2CQ8NEZ4 4911 aaKnown RBP12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 IGHV4-28A0A0C4DH34 117 aa12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 TAAR5O14804 337 aa12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 CDC34P49427 236 aaPredicted RBP12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 ICAM4Q14773 271 aa12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 KCNRGQ8N5I3 272 aa12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 AAMDCQ9H7C9 122 aa12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 PLECQ15149 4684 aaKnown RBP12.65□□□□□ -0.38
CHRDL2-206ENST00000528789 CSMD3Q7Z407 3707 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 HMSDA8MTL9 139 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 BOLA2-SMG1P6H3BVE0 249 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 JTBO76095 146 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 SERF2P84101 59 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 RPP25LQ8N5L8 163 aaKnown RBP12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 Q8NAQ8 132 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 IL17DQ8TAD2 202 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
CHRDL2-206ENST00000528789 CRXO43186 299 aaPredicted RBP12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 MBP02144 154 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 MIFP14174 115 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 RANP62826 216 aaKnown RBP12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 ZNF345Q14585 488 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 CASC10Q5T4H9 136 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 MRPL53Q96EL3 112 aaKnown RBP12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 IGF2BP2-AS1Q96M15 143 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 C11orf68Q9H3H3 251 aaKnown RBP12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 PRELID1Q9Y255 219 aa12.63□□□□□ -0.39
CHRDL2-206ENST00000528789 ERCC8Q13216 396 aa12.62□□□□□ -0.39
CHRDL2-206ENST00000528789 PMS2P11Q13670 270 aa12.62□□□□□ -0.39
CHRDL2-206ENST00000528789 ZNF705AQ6ZN79 300 aaPredicted RBP12.62□□□□□ -0.39
CHRDL2-206ENST00000528789 RAB24Q969Q5 203 aa12.62□□□□□ -0.39
CHRDL2-206ENST00000528789 Q9H3A6 140 aa12.62□□□□□ -0.39
CHRDL2-206ENST00000528789 GOLT1BQ9Y3E0 138 aa12.62□□□□□ -0.39
CHRDL2-206ENST00000528789 DYNC2H1Q8NCM8 4307 aaKnown RBP12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 IGKV2-40A0A087WW87 121 aaPredicted RBP12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 A0A0D9SG52 128 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 INSP01308 110 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 IGKV2D-40P01614 121 aaPredicted RBP12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 AMBPP02760 352 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 PQLC2Q6ZP29 291 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 SSX7Q7RTT5 188 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 TCTE3Q8IZS6 198 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 TMEM208Q9BTX3 173 aa12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
CHRDL2-206ENST00000528789 KANTRA0A1W2PQU2 76 aa12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 J3KRW8 73 aa12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 BCL2L11O43521 198 aa12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 STAG3L2P0CL84 134 aa12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 STAG3L3P0CL85 134 aa12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 CT45A10P0DMU9 189 aa12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 ZNF471Q9BX82 626 aaPredicted RBP12.6□□□□□ -0.39
CHRDL2-206ENST00000528789 CXorf65A6NEN9 183 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 CDKN1BP46527 198 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 NANOS2P60321 138 aaKnown RBP12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 AKR1C8PQ5T2L2 129 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 TMUB2Q71RG4 321 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 C11orf45Q8TAV5 145 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 HYLS1Q96M11 299 aa12.59□□□□□ -0.39
CHRDL2-206ENST00000528789 A0A1B0GVG6 124 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 PFDN1O60925 122 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 EMP1P54849 157 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 AKAP14Q86UN6 197 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 LYPD1Q8N2G4 141 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 NEU1Q99519 415 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 VGLL1Q99990 258 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 AGPAT4-IT1Q9H0P7 198 aa12.58□□□□□ -0.4
CHRDL2-206ENST00000528789 HBE1P02100 147 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 PRM2P04554 102 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 GCHFRP30047 84 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 TSPOP30536 169 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 LEPP41159 167 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 CSN1S1P47710 185 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 OTORQ9NRC9 128 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 RPH3ALQ9UNE2 315 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 SACSQ9NZJ4 4579 aa12.57□□□□□ -0.4
CHRDL2-206ENST00000528789 PGPA6NDG6 321 aa12.56□□□□□ -0.4
CHRDL2-206ENST00000528789 SMIM9A6NGZ8 99 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms