RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 A8MTW9 85 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 PYYP10082 97 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 TCTAP57738 103 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 RPP25LQ8N5L8 163 aaKnown RBP10.25□□□□□ -0.77
CAPN1-216ENST00000528739 LYSTQ99698 3801 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 MED28Q9H204 178 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 HSPB11Q9Y547 144 aa10.25□□□□□ -0.77
CAPN1-216ENST00000528739 IGHV4-4A0A075B6R2 117 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 PRAC2D3DTV9 90 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 CRXO43186 299 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-216ENST00000528739 PTTG1O95997 202 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 PRM2P04554 102 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 HIST1H1EP10412 219 aaKnown RBP10.24□□□□□ -0.77
CAPN1-216ENST00000528739 TSPOP30536 169 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 CDKN1BP46527 198 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 LGALS9CQ6DKI2 356 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 SAT2Q96F10 170 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-216ENST00000528739 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-216ENST00000528739 AAMDCQ9H7C9 122 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 DKK2Q9UBU2 259 aa10.24□□□□□ -0.77
CAPN1-216ENST00000528739 PLECQ15149 4684 aaKnown RBP10.23□□□□□ -0.77
CAPN1-216ENST00000528739 TRBV19A0A075B6N1 114 aa10.23□□□□□ -0.77
CAPN1-216ENST00000528739 DAD1P61803 113 aa10.23□□□□□ -0.77
CAPN1-216ENST00000528739 FFAR4Q5NUL3 377 aa10.23□□□□□ -0.77
CAPN1-216ENST00000528739 OR51M1Q9H341 326 aa10.23□□□□□ -0.77
CAPN1-216ENST00000528739 TMEM14CQ9P0S9 112 aa10.23□□□□□ -0.77
CAPN1-216ENST00000528739 APLNQ9ULZ1 77 aa10.23□□□□□ -0.77
CAPN1-216ENST00000528739 OR7C2O60412 319 aa10.22□□□□□ -0.77
CAPN1-216ENST00000528739 NDUFAF3Q9BU61 184 aa10.22□□□□□ -0.77
CAPN1-216ENST00000528739 PAXXQ9BUH6 204 aa10.22□□□□□ -0.77
CAPN1-216ENST00000528739 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
CAPN1-216ENST00000528739 HYDINQ4G0P3 5121 aa10.22□□□□□ -0.77
CAPN1-216ENST00000528739 M0R3E3 92 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 ZNF253O75346 499 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 OR10J4P0C629 311 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 DEFB130BP0DP73 79 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 DEFB130AP0DP74 79 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 LEPP41159 167 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 FCN2Q15485 313 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 CCDC28AQ8IWP9 274 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 TMEM256Q8N2U0 113 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 MRPL32Q9BYC8 188 aaKnown RBP10.21□□□□□ -0.77
CAPN1-216ENST00000528739 PRELID1Q9Y255 219 aa10.21□□□□□ -0.77
CAPN1-216ENST00000528739 NBEAP1P0C6P0 100 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 AZU1P20160 251 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 TAS2R60P59551 318 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 ERCC8Q13216 396 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 ICAM4Q14773 271 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 RNF141Q8WVD5 230 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 FUT9Q9Y231 359 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 ALMS1Q8TCU4 4167 aa10.2□□□□□ -0.78
CAPN1-216ENST00000528739 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
CAPN1-216ENST00000528739 H7BYZ3 331 aa10.19□□□□□ -0.78
CAPN1-216ENST00000528739 CT45A10P0DMU9 189 aa10.19□□□□□ -0.78
CAPN1-216ENST00000528739 PDE6HQ13956 83 aa10.19□□□□□ -0.78
CAPN1-216ENST00000528739 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
CAPN1-216ENST00000528739 MRPL53Q96EL3 112 aaKnown RBP10.19□□□□□ -0.78
CAPN1-216ENST00000528739 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 LYRM9A8MSI8 78 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 NPIPB6E9PJ23 425 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 NDUFB4O95168 129 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 CSN1S1P47710 185 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 TAS2R45P59539 299 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-216ENST00000528739 GFI1BQ5VTD9 330 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 FAM167A-AS1Q96KT0 104 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 WFDC1Q9HC57 220 aa10.18□□□□□ -0.78
CAPN1-216ENST00000528739 EIF3GO75821 320 aaKnown RBP eCLIP10.17□□□□□ -0.78
CAPN1-216ENST00000528739 RANP62826 216 aaKnown RBP10.17□□□□□ -0.78
CAPN1-216ENST00000528739 UBE2L3P68036 154 aaKnown RBP10.17□□□□□ -0.78
CAPN1-216ENST00000528739 RGS21Q2M5E4 152 aa10.17□□□□□ -0.78
CAPN1-216ENST00000528739 KHDC3LQ587J8 217 aa10.17□□□□□ -0.78
CAPN1-216ENST00000528739 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
CAPN1-216ENST00000528739 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
CAPN1-216ENST00000528739 LINC00477Q96M19 166 aa10.17□□□□□ -0.78
CAPN1-216ENST00000528739 C20orf144Q9BQM9 153 aa10.17□□□□□ -0.78
CAPN1-216ENST00000528739 NOP10Q9NPE3 64 aaKnown RBP10.17□□□□□ -0.78
CAPN1-216ENST00000528739 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-216ENST00000528739 DNAH1Q9P2D7 4330 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-216ENST00000528739 F5H768 121 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-216ENST00000528739 P0DMU3 169 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 RNASE4P34096 147 aaKnown RBP10.16□□□□□ -0.78
CAPN1-216ENST00000528739 OXA1LQ15070 435 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 FXYD5Q96DB9 178 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 HYLS1Q96M11 299 aa10.16□□□□□ -0.78
CAPN1-216ENST00000528739 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
CAPN1-216ENST00000528739 GPX1P07203 203 aa10.15□□□□□ -0.78
CAPN1-216ENST00000528739 ZNF266Q14584 549 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms