RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MED28Q9H204 178 aa18.88■□□□□ 0.61
TSPAN4-217ENST00000527644 TRAV12-2A0A075B6T6 113 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 IGLL5B9A064 214 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 PRAC2D3DTV9 90 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 IFNA5P01569 189 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 PDE6HQ13956 83 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 ZNF767PQ75MW2 155 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 SCGB1C1Q8TD33 95 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 SLC25A2Q9BXI2 301 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 DKK2Q9UBU2 259 aa18.87■□□□□ 0.61
TSPAN4-217ENST00000527644 PYYP10082 97 aa18.86■□□□□ 0.61
TSPAN4-217ENST00000527644 CDKN1BP46527 198 aa18.86■□□□□ 0.61
TSPAN4-217ENST00000527644 LGALS9CQ6DKI2 356 aa18.86■□□□□ 0.61
TSPAN4-217ENST00000527644 MRPL32Q9BYC8 188 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-217ENST00000527644 SMIM3Q9BZL3 60 aa18.86■□□□□ 0.61
TSPAN4-217ENST00000527644 TIMM9Q9Y5J7 89 aa18.86■□□□□ 0.61
TSPAN4-217ENST00000527644 DEFB131BA0A096LNP1 70 aa18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 FCN2Q15485 313 aa18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 FAM222AQ5U5X8 452 aa18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 MIR17HGQ75NE6 70 aa18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 TMEM256Q8N2U0 113 aa18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 MRPL53Q96EL3 112 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 FAM167A-AS1Q96KT0 104 aa18.85■□□□□ 0.61
TSPAN4-217ENST00000527644 NDUFB4O95168 129 aa18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 RPP25LQ8N5L8 163 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 PARD6GQ9BYG4 376 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 APLNQ9ULZ1 77 aa18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 FUT9Q9Y231 359 aa18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 PRELID1Q9Y255 219 aa18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 YTHDF2Q9Y5A9 579 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-217ENST00000527644 ZNF705GA8MUZ8 300 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-217ENST00000527644 TSPOP30536 169 aa18.83■□□□□ 0.6
TSPAN4-217ENST00000527644 BLNKQ8WV28 456 aa18.83■□□□□ 0.6
TSPAN4-217ENST00000527644 OR51M1Q9H341 326 aa18.83■□□□□ 0.6
TSPAN4-217ENST00000527644 FFAR4Q5NUL3 377 aa18.82■□□□□ 0.6
TSPAN4-217ENST00000527644 LINC01587Q99440 93 aa18.82■□□□□ 0.6
TSPAN4-217ENST00000527644 NIPSNAP3BQ9BS92 247 aa18.82■□□□□ 0.6
TSPAN4-217ENST00000527644 WFDC1Q9HC57 220 aa18.82■□□□□ 0.6
TSPAN4-217ENST00000527644 NPIPB6E9PJ23 425 aa18.81■□□□□ 0.6
TSPAN4-217ENST00000527644 OXA1LQ15070 435 aa18.81■□□□□ 0.6
TSPAN4-217ENST00000527644 PAXXQ9BUH6 204 aa18.81■□□□□ 0.6
TSPAN4-217ENST00000527644 IGHV4-4A0A075B6R2 117 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 M0R3E3 92 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 PRM2P04554 102 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 NBEAP1P0C6P0 100 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 TAS2R60P59551 318 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 ASB13Q8WXK3 278 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 ODF3Q96PU9 254 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 C20orf144Q9BQM9 153 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 AAMDCQ9H7C9 122 aa18.8■□□□□ 0.6
TSPAN4-217ENST00000527644 CT45A10P0DMU9 189 aa18.79■□□□□ 0.6
TSPAN4-217ENST00000527644 RGS21Q2M5E4 152 aa18.79■□□□□ 0.6
TSPAN4-217ENST00000527644 EXOC3-AS1Q8N2X6 119 aa18.78■□□□□ 0.6
TSPAN4-217ENST00000527644 RNF141Q8WVD5 230 aa18.78■□□□□ 0.6
TSPAN4-217ENST00000527644 FXYD5Q96DB9 178 aa18.78■□□□□ 0.6
TSPAN4-217ENST00000527644 H7BYZ3 331 aa18.77■□□□□ 0.6
TSPAN4-217ENST00000527644 GIPP09681 153 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-217ENST00000527644 AZU1P20160 251 aa18.77■□□□□ 0.6
TSPAN4-217ENST00000527644 LEPP41159 167 aa18.77■□□□□ 0.6
TSPAN4-217ENST00000527644 PLA2G2EQ9NZK7 142 aa18.77■□□□□ 0.6
TSPAN4-217ENST00000527644 LYRM9A8MSI8 78 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 OR7C2O60412 319 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 OR10J4P0C629 311 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 ICAM4Q14773 271 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 KIR3DS1Q14943 382 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 GFI1BQ5VTD9 330 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 LINC00477Q96M19 166 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 AQP10Q96PS8 301 aa18.76■□□□□ 0.59
TSPAN4-217ENST00000527644 HTN1P15515 57 aa18.75■□□□□ 0.59
TSPAN4-217ENST00000527644 TAS2R45P59539 299 aa18.75■□□□□ 0.59
TSPAN4-217ENST00000527644 DAD1P61803 113 aa18.75■□□□□ 0.59
TSPAN4-217ENST00000527644 ERCC8Q13216 396 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 ZNF266Q14584 549 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 ACOT6Q3I5F7 207 aaPredicted RBP18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 KHDC3LQ587J8 217 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 ZNF493Q6ZR52 646 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 ZNF503Q96F45 646 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 C16orf74Q96GX8 76 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 NDUFAF3Q9BU61 184 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 VPS13DQ5THJ4 4388 aa18.74■□□□□ 0.59
TSPAN4-217ENST00000527644 PLAC8L1A1L4L8 177 aa18.73■□□□□ 0.59
TSPAN4-217ENST00000527644 Q5BKY6 102 aa18.73■□□□□ 0.59
TSPAN4-217ENST00000527644 FAM122CQ6P4D5 195 aa18.73■□□□□ 0.59
TSPAN4-217ENST00000527644 FAM210BQ96KR6 192 aa18.73■□□□□ 0.59
TSPAN4-217ENST00000527644 AGPAT4-IT1Q9H0P7 198 aa18.73■□□□□ 0.59
TSPAN4-217ENST00000527644 KMT2AQ03164 3969 aa18.73■□□□□ 0.59
TSPAN4-217ENST00000527644 M6PRP20645 277 aa18.72■□□□□ 0.59
TSPAN4-217ENST00000527644 UBE2L3P68036 154 aaKnown RBP18.72■□□□□ 0.59
TSPAN4-217ENST00000527644 C9orf47Q6ZRZ4 202 aa18.72■□□□□ 0.59
TSPAN4-217ENST00000527644 LYPD1Q8N2G4 141 aa18.72■□□□□ 0.59
TSPAN4-217ENST00000527644 PHYHIPLQ96FC7 376 aa18.72■□□□□ 0.59
TSPAN4-217ENST00000527644 J3KRW8 73 aa18.71■□□□□ 0.59
TSPAN4-217ENST00000527644 TMEM263Q8WUH6 116 aaKnown RBP18.71■□□□□ 0.59
TSPAN4-217ENST00000527644 SLC25A5P05141 298 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-217ENST00000527644 RNASE8Q8TDE3 154 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-217ENST00000527644 FAM19A4Q96LR4 140 aa18.7■□□□□ 0.58
TSPAN4-217ENST00000527644 TIMM8BQ9Y5J9 83 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-217ENST00000527644 TRAV12-3A0A0B4J271 114 aa18.69■□□□□ 0.58
TSPAN4-217ENST00000527644 A0A1W2PPV4 95 aa18.69■□□□□ 0.58
TSPAN4-217ENST00000527644 HTN3P15516 51 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms