RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ADAMTSL5Q6ZMM2 481 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 RBPMS2Q6ZRY4 209 aaKnown RBP9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 EXOC3-AS1Q8N2X6 119 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 C5orf17Q8NAS9 161 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 C16orf92Q96LL3 132 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 ZNF331Q9NQX6 463 aaPredicted RBP9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 ZMAT5Q9UDW3 170 aaKnown RBP9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 PRELID1Q9Y255 219 aa9.54□□□□□ -0.88
SSSCA1-203ENST00000526877 DNAH9Q9NYC9 4486 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 KRBOX1C9JBD0 128 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 C9JQL5 133 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 SLC17A3O00476 420 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 ID1P41134 155 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 CSN1S1P47710 185 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 SOHLH1Q5JUK2 328 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 CYB561D1Q8N8Q1 229 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 HIST1H2BAQ96A08 127 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 EPDR1Q9UM22 224 aa9.53□□□□□ -0.88
SSSCA1-203ENST00000526877 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 F8W036 122 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 ATP6V1G1O75348 118 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 SAP30O75446 220 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 ARL6IP6Q8N6S5 226 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 C11orf52Q96A22 123 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 PRR25Q96S07 402 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 MS4A6AQ9H2W1 248 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 SELENOKQ9Y6D0 94 aa9.52□□□□□ -0.89
SSSCA1-203ENST00000526877 TRAV2A0A0B4J234 112 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 K7EQM0 130 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 PEX7O00628 323 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 ISLRO14498 428 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 S100A1P23297 94 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 INSL3P51460 131 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 FAM74A3Q4VXF1 159 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 ATG101Q9BSB4 218 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 TENM3Q9P273 2699 aa9.51□□□□□ -0.89
SSSCA1-203ENST00000526877 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 SERTM2A0A1B0GWG4 89 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 TSPAN4O14817 238 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 TCRAP04437 139 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 AKR1C3P42330 323 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 TFPI2P48307 235 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 CNN1P51911 297 aaKnown RBP9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 GNG5P63218 68 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 PSG3Q16557 428 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 ZNF674Q2M3X9 581 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 IGFL4Q6B9Z1 124 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 OR2K2Q8NGT1 345 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 DCANP1Q8TF63 244 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 SEC11CQ9BY50 192 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 PARLQ9H300 379 aa9.5□□□□□ -0.89
SSSCA1-203ENST00000526877 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 DIRC3C9JPN6 131 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 K7EQG2 157 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 M0R3E3 92 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 SOCS3O14543 225 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 HLA-DMBP28068 263 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 SNRPD3P62318 126 aaKnown RBP9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 RNF182Q8N6D2 247 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 LINC00052Q96N35 136 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 ZNF256Q9Y2P7 627 aaPredicted RBP9.49□□□□□ -0.89
SSSCA1-203ENST00000526877 STAB2Q8WWQ8 2551 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 OR4C46A6NHA9 309 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 TAS2R60P59551 318 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 UBE2G1P62253 170 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 GOLT1AQ6ZVE7 132 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 ZNF738Q8NE65 137 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 SPAG8Q99932 426 aaPredicted RBP9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 NIPSNAP3BQ9BS92 247 aa9.48□□□□□ -0.89
SSSCA1-203ENST00000526877 FBLL1A6NHQ2 334 aaKnown RBP9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 IGLV1-51P01701 117 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 ADCYAP1P18509 176 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 RPL35P42766 123 aaKnown RBP9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 GUCA2BQ16661 112 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 TMEM183BQ1AE95 376 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 C10orf91Q5T1B1 145 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 CARHSP1Q9Y2V2 147 aaKnown RBP9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 KLF12Q9Y4X4 402 aa9.47□□□□□ -0.89
SSSCA1-203ENST00000526877 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 APOC3P02656 99 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
SSSCA1-203ENST00000526877 TMEM75Q8N9X5 138 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms