RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HMGB3O15347 200 aaKnown RBP7.94□□□□□ -1.14
NEDD8-204ENST00000526430 STAG3L2P0CL84 134 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 STAG3L3P0CL85 134 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 PRB4P10163 310 aaPredicted RBP7.94□□□□□ -1.14
NEDD8-204ENST00000526430 HIST1H1EP10412 219 aaKnown RBP7.94□□□□□ -1.14
NEDD8-204ENST00000526430 RHOBP62745 196 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 TMEM41BQ5BJD5 291 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 FAM122CQ6P4D5 195 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 Q6ZWC4 215 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 RNF182Q8N6D2 247 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 MAPKAPK5-AS1Q8N8E1 139 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 RNF141Q8WVD5 230 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 OR51M1Q9H341 326 aa7.94□□□□□ -1.14
NEDD8-204ENST00000526430 LOC102724200A0A096LPH7 203 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-204ENST00000526430 KNCNA6PVL3 124 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 PRAC2D3DTV9 90 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 F6UB75 175 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 BOLA2-SMG1P6H3BVE0 249 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 ISLRO14498 428 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 RTL8CO15255 209 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
NEDD8-204ENST00000526430 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 S100A7P31151 101 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 PSMB3P49720 205 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 PSMG4Q5JS54 123 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF575Q86XF7 245 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 TMED6Q8WW62 240 aa7.93□□□□□ -1.14
NEDD8-204ENST00000526430 A8MTW9 85 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF705FA8MVS1 300 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-204ENST00000526430 SPRY2O43597 315 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 PFDN1O60925 122 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF253O75346 499 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 MBP02144 154 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 OR10J4P0C629 311 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 MEOX2P50222 304 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
NEDD8-204ENST00000526430 PSG3Q16557 428 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 S100A7AQ86SG5 101 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 SLC51BQ86UW2 128 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 Q8N1X5 172 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 MBD3L1Q8WWY6 194 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
NEDD8-204ENST00000526430 A0A1W2PPV4 95 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 H3BMM0 161 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 ARL14EPLP0DKL9 152 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 TPT1P13693 172 aaKnown RBP7.91□□□□□ -1.14
NEDD8-204ENST00000526430 CDC34P49427 236 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-204ENST00000526430 GUK1Q16774 197 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 LCN15Q6UWW0 184 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
NEDD8-204ENST00000526430 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 C2CD4CQ8TF44 421 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 PHYHIPLQ96FC7 376 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 C16orf92Q96LL3 132 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 LINC00052Q96N35 136 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-204ENST00000526430 TMPRSS5Q9H3S3 457 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 SAV1Q9H4B6 383 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-204ENST00000526430 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
NEDD8-204ENST00000526430 UBR4Q5T4S7 5183 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 A0A0J9YX75 114 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 CTXND1A0A1B0GTU2 59 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 M0R3E3 92 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF705DP0CH99 300 aaPredicted RBP7.9□□□□□ -1.14
NEDD8-204ENST00000526430 ZNF705BP0CI00 300 aaPredicted RBP7.9□□□□□ -1.14
NEDD8-204ENST00000526430 GCHFRP30047 84 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 ID1P41134 155 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 AMTNQ6UX39 209 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 PQLC2Q6ZP29 291 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 BLNKQ8WV28 456 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 APLNQ9ULZ1 77 aa7.9□□□□□ -1.14
NEDD8-204ENST00000526430 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.15
NEDD8-204ENST00000526430 UMAD1C9J7I0 102 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 UBE2CO00762 179 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 OR7C2O60412 319 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 SULT1A2P50226 295 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 APOC4P55056 127 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 FGF8P55075 233 aaPredicted RBP7.89□□□□□ -1.15
NEDD8-204ENST00000526430 TAS2R45P59539 299 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 SNRPD3P62318 126 aaKnown RBP7.89□□□□□ -1.15
NEDD8-204ENST00000526430 EIF5AP63241 154 aaKnown RBP7.89□□□□□ -1.15
NEDD8-204ENST00000526430 CCL20P78556 96 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 PDE6HQ13956 83 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 DEFB135Q30KP9 77 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 FAM74A1Q5RGS3 127 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 AKR1C8PQ5T2L2 129 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 DMRTA1Q5VZB9 504 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 CLUHP3Q96NS8 147 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 SLC50A1Q9BRV3 221 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
NEDD8-204ENST00000526430 RPL35AP18077 110 aaKnown RBP7.88□□□□□ -1.15
NEDD8-204ENST00000526430 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
NEDD8-204ENST00000526430 UBE2L3P68036 154 aaKnown RBP7.88□□□□□ -1.15
NEDD8-204ENST00000526430 ICAM4Q14773 271 aa7.88□□□□□ -1.15
NEDD8-204ENST00000526430 SAMD13Q5VXD3 122 aa7.88□□□□□ -1.15
NEDD8-204ENST00000526430 FOXI2Q6ZQN5 318 aa7.88□□□□□ -1.15
NEDD8-204ENST00000526430 CSNK1G2-AS1Q8NCQ2 148 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms