RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 LCN15Q6UWW0 184 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 STHQ8IWL8 128 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 KIR2DL5BQ8NHK3 375 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 SFT2D1Q8WV19 159 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 MBD3L1Q8WWY6 194 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 SMDT1Q9H4I9 107 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 ZNF586Q9NXT0 402 aa9.53□□□□□ -0.88
SMPD1-202ENST00000526280 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 MBP02144 154 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 PYYP10082 97 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
SMPD1-202ENST00000526280 APOC4P55056 127 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 TRPT1Q86TN4 253 aaKnown RBP9.52□□□□□ -0.89
SMPD1-202ENST00000526280 OR10G4Q8NGN3 311 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 OR10G9Q8NGN4 311 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 OR10G7Q8NGN6 311 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 SLC35B3Q9H1N7 401 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 OR51M1Q9H341 326 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
SMPD1-202ENST00000526280 RPRMQ9NS64 109 aa9.52□□□□□ -0.89
SMPD1-202ENST00000526280 TRBV19A0A075B6N1 114 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 H3BMM0 161 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 H3BTX0 84 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 SLC17A3O00476 420 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 UBE2CO00762 179 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 HLA-DRB4P13762 266 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 TAS2R45P59539 299 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 DEFB1P60022 68 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 PSG3Q16557 428 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF506Q5JVG8 444 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 GDF5OSQ5U4N7 250 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 FOXI2Q6ZQN5 318 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 RPP25LQ8N5L8 163 aaKnown RBP9.51□□□□□ -0.89
SMPD1-202ENST00000526280 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 RARRES2Q99969 163 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 PAXXQ9BUH6 204 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 ZMAT4Q9H898 229 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 HLA-DRB4X5D2U9 266 aa9.51□□□□□ -0.89
SMPD1-202ENST00000526280 LOC105371267A0A1B0GV96 52 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF253O75346 499 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 HLA-DMBP28068 263 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 PDE6HQ13956 83 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 KHDC3LQ587J8 217 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 FXYD5Q96DB9 178 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF503Q96F45 646 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
SMPD1-202ENST00000526280 A0A0J9YX75 114 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 F6UB75 175 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 OR7C2O60412 319 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 EIF3GO75821 320 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMPD1-202ENST00000526280 NDUFB4O95168 129 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 SRP19P09132 144 aaKnown RBP9.49□□□□□ -0.89
SMPD1-202ENST00000526280 NBEAP1P0C6P0 100 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 ICAM4Q14773 271 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 Q6ZWC4 215 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF738Q8NE65 137 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 BLNKQ8WV28 456 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
SMPD1-202ENST00000526280 LOC102723971A0A1B0GUV8 181 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 OR10J4P0C629 311 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 CDC34P49427 236 aaPredicted RBP9.48□□□□□ -0.89
SMPD1-202ENST00000526280 PSG9Q00887 426 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 SOHLH1Q5JUK2 328 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 MORN3Q6PF18 240 aaPredicted RBP9.48□□□□□ -0.89
SMPD1-202ENST00000526280 PQLC2Q6ZP29 291 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 CBLN2Q8IUK8 224 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 RXFP4Q8TDU9 374 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 RAB24Q969Q5 203 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 ACTR3CQ9C0K3 210 aaPredicted RBP9.48□□□□□ -0.89
SMPD1-202ENST00000526280 U3KQK5 164 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 TENM3Q9P273 2699 aa9.48□□□□□ -0.89
SMPD1-202ENST00000526280 A8MTW9 85 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 ZNF705FA8MVS1 300 aaPredicted RBP9.47□□□□□ -0.89
SMPD1-202ENST00000526280 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
SMPD1-202ENST00000526280 GIG44P09565 113 aaPredicted RBP9.47□□□□□ -0.89
SMPD1-202ENST00000526280 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 UBE2L3P68036 154 aaKnown RBP9.47□□□□□ -0.89
SMPD1-202ENST00000526280 SSX7Q7RTT5 188 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 RPUSD4Q96CM3 377 aaKnown RBP9.47□□□□□ -0.89
SMPD1-202ENST00000526280 RCHY1Q96PM5 261 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 OVOL2Q9BRP0 275 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 RETNQ9HD89 108 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 GNG13Q9P2W3 67 aa9.47□□□□□ -0.89
SMPD1-202ENST00000526280 C7orf77A4D0Y5 90 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 MAP1LC3B2A6NCE7 125 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms