RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 hCG_1818297A0A087WSY0 165 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 TRAV27A0A087WT01 109 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 A0A087WUJ7 227 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 TRGV10A0A0A0MS01 117 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 A0A0A6YYH2 397 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 LOC107984156A0A0G2JMH3 177 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 ODAMA1E959 279 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 A6NJ64 397 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CLDN24A6NM45 220 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 A8MT66 165 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 FAM25EA8MYX2 175 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 C17orf112F2Z3M2 114 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 TMEM256-PLSCR3K7ERE1 68 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CYB5BO43169 146 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 DEXIO95424 95 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CRYZL1O95825 349 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 IGHV3-30P01768 117 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CALB1P05937 261 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 IGHV3-30-5P0DP03 117 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CAV3P56539 151 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CDK6Q00534 326 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 RRN3P1Q2M238 152 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 XAF1Q6GPH4 301 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 C8orf74Q6P047 294 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 FOXI2Q6ZQN5 318 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 LINC00299Q6ZSB3 139 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 ZCCHC23Q6ZST2 131 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 ARL17AQ8IVW1 177 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 OR6V1Q8N148 313 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 LINC00269Q8N2A0 174 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CLDN22Q8N7P3 220 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 SLC25A40Q8TBP6 338 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 CT55Q8WUE5 264 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 RAB37Q96AX2 223 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 MALSU1Q96EH3 234 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 C8orf76Q96K31 380 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 LINC00208Q96KT6 92 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 SLC25A21Q9BQT8 299 aaPredicted RBP-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 PARD6GQ9BYG4 376 aaPredicted RBP-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 DRC3Q9H069 523 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 RNASE7Q9H1E1 156 aaKnown RBP-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 FBXO5Q9UKT4 447 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 GUCA1BQ9UMX6 200 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 LY96Q9Y6Y9 160 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 SOGA1O94964 1423 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 PKHD1L1Q86WI1 4243 aa-0.33□□□□□ -2.46
CSDE1-210ENST00000525878 URB1O60287 2271 aaKnown RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 CDK12Q9NYV4 1490 aaPredicted RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 DNAJC13O75165 2243 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 TRBV19A0A075B6N1 114 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 A0A1W2PRS3 328 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 hDV103S1A0JD37 113 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 C10orf142B7Z368 130 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 J3QRK9 145 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 M0QX08 132 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 M0R233 179 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 GPR31O00270 319 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 KPNA3O00505 521 aaPredicted RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 PIAS1O75925 651 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 ZFYVE9O95405 1425 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 HAND1O96004 215 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 IFNA5P01569 189 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 C1QBP02746 253 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 PRM1P04553 51 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 IFNA16P05015 189 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 C8GP07360 202 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 SMIM17P0DL12 118 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 HLA-EP13747 358 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 EVI2AP22794 236 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 ATP5G3P48201 142 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 SULT1A1P50225 295 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 DYNLT3P51808 116 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 BLMP54132 1417 aaPredicted RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 PIGPP57054 158 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 DEFA3P59666 94 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 VBP1P61758 197 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 UBE2BP63146 152 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 EIF5AP63241 154 aaKnown RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 MIR22HGQ0VDD5 57 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 KRR1Q13601 381 aaKnown RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 FXYD3Q14802 87 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 IMPG1Q17R60 797 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 HIST2H3PS2Q5TEC6 136 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 KRT222Q8N1A0 295 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 C5orf56Q8N8D9 126 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 OR51A2Q8NGJ7 313 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 OR5D16Q8NGK9 328 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 ZNF431Q8TF32 576 aaPredicted RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 FAM172AQ8WUF8 416 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 TEX37Q96LM6 180 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 HYLS1Q96M11 299 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 YPEL2Q96QA6 119 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 LLPHQ9BRT6 129 aaKnown RBP-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 TVP23BQ9NYZ1 205 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 USE1Q9NZ43 259 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 PI4KAP42356 2102 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 CPDO75976 1380 aa-0.34□□□□□ -2.46
CSDE1-210ENST00000525878 CAMSAP2Q08AD1 1489 aa-0.35□□□□□ -2.46
CSDE1-210ENST00000525878 CDK5RAP2Q96SN8 1893 aa-0.35□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms