RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-218ENST00000525459 IQCF2Q8IXL9 164 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 ARL6IP6Q8N6S5 226 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 Q9H3A6 140 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 OTORQ9NRC9 128 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 PLA2G2EQ9NZK7 142 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 RBMY1BA6NDE4 496 aaKnown RBP13.81□□□□□ -0.2
PTPRK-218ENST00000525459 RBMY1EA6NEQ0 496 aaKnown RBP13.81□□□□□ -0.2
PTPRK-218ENST00000525459 H3BMM0 161 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 RBMY1DP0C7P1 496 aaKnown RBP13.81□□□□□ -0.2
PTPRK-218ENST00000525459 RANP62826 216 aaKnown RBP13.81□□□□□ -0.2
PTPRK-218ENST00000525459 ICAM4Q14773 271 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 RXFP4Q8TDU9 374 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 SFT2D1Q8WV19 159 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 BOLA1Q9Y3E2 137 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 ARL2-SNX15V9GYD0 113 aa13.81□□□□□ -0.2
PTPRK-218ENST00000525459 KNCNA6PVL3 124 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 UBE2CO00762 179 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 HBE1P02100 147 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 HLA-DMBP28068 263 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 CSN1S1P47710 185 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 PPT1P50897 306 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 OR8A1Q8NGG7 326 aa13.8□□□□□ -0.2
PTPRK-218ENST00000525459 NKX6-2Q9C056 277 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-218ENST00000525459 TRAV1-1A0A0B4J248 108 aa13.79□□□□□ -0.2
PTPRK-218ENST00000525459 A0A1W2PRE2 83 aa13.79□□□□□ -0.2
PTPRK-218ENST00000525459 ALKAL2Q6UX46 152 aa13.79□□□□□ -0.2
PTPRK-218ENST00000525459 EXOC3-AS1Q8N2X6 119 aa13.79□□□□□ -0.2
PTPRK-218ENST00000525459 OR10J6PQ8NGY7 276 aa13.79□□□□□ -0.2
PTPRK-218ENST00000525459 A8MTW9 85 aa13.78□□□□□ -0.2
PTPRK-218ENST00000525459 FGF8P55075 233 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-218ENST00000525459 CMTM2Q8TAZ6 248 aa13.78□□□□□ -0.2
PTPRK-218ENST00000525459 RPL35AP18077 110 aaKnown RBP13.78□□□□□ -0.2
PTPRK-218ENST00000525459 GDF5OSQ5U4N7 250 aa13.78□□□□□ -0.2
PTPRK-218ENST00000525459 C1QTNF4Q9BXJ3 329 aa13.78□□□□□ -0.2
PTPRK-218ENST00000525459 CSTL1Q9H114 145 aa13.78□□□□□ -0.2
PTPRK-218ENST00000525459 F6UB75 175 aa13.77□□□□□ -0.21
PTPRK-218ENST00000525459 M0R3E3 92 aa13.77□□□□□ -0.21
PTPRK-218ENST00000525459 CNN1P51911 297 aaKnown RBP13.77□□□□□ -0.21
PTPRK-218ENST00000525459 HIST1H1AQ02539 215 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-218ENST00000525459 OR4B1Q8NGF8 309 aa13.77□□□□□ -0.21
PTPRK-218ENST00000525459 SERTM2A0A1B0GWG4 89 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 ZNF705EA8MWA4 302 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-218ENST00000525459 NHLRC4P0CG21 123 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-218ENST00000525459 BLOC1S1P78537 153 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 HAGHQ16775 308 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 C5orf17Q8NAS9 161 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 PGPA6NDG6 321 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 ZNF705FA8MVS1 300 aaPredicted RBP13.76□□□□□ -0.21
PTPRK-218ENST00000525459 AMBPP02760 352 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 SLC25A5P05141 298 aaKnown RBP13.76□□□□□ -0.21
PTPRK-218ENST00000525459 Q6ZWC4 215 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 TCEAL7Q9BRU2 100 aa13.76□□□□□ -0.21
PTPRK-218ENST00000525459 NPIPB6E9PJ23 425 aa13.75□□□□□ -0.21
PTPRK-218ENST00000525459 DEFB1P60022 68 aa13.75□□□□□ -0.21
PTPRK-218ENST00000525459 ODF3Q96PU9 254 aa13.75□□□□□ -0.21
PTPRK-218ENST00000525459 TMPRSS5Q9H3S3 457 aa13.75□□□□□ -0.21
PTPRK-218ENST00000525459 CA1P00915 261 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-218ENST00000525459 TEX261Q6UWH6 196 aa13.74□□□□□ -0.21
PTPRK-218ENST00000525459 SBSPONQ8IVN8 264 aa13.74□□□□□ -0.21
PTPRK-218ENST00000525459 SPATA25Q9BR10 227 aa13.74□□□□□ -0.21
PTPRK-218ENST00000525459 ZMAT4Q9H898 229 aa13.74□□□□□ -0.21
PTPRK-218ENST00000525459 MANBALQ9NQG1 85 aa13.74□□□□□ -0.21
PTPRK-218ENST00000525459 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
PTPRK-218ENST00000525459 FAM74A7A6NL05 159 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 IFNA7P01567 189 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 TM2D3Q9BRN9 247 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 TP53TG1Q9Y2A0 90 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 GGTLC3B5MD39 225 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 PRAC2D3DTV9 90 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 K7EQM0 130 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 SUMO1P63165 101 aaKnown RBP13.73□□□□□ -0.21
PTPRK-218ENST00000525459 TMEM78Q5T7P6 136 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 LINC00477Q96M19 166 aa13.73□□□□□ -0.21
PTPRK-218ENST00000525459 IFNA1P01562 189 aa13.72□□□□□ -0.21
PTPRK-218ENST00000525459 IGKV3-20P01619 116 aa13.72□□□□□ -0.21
PTPRK-218ENST00000525459 TSPOP30536 169 aa13.72□□□□□ -0.21
PTPRK-218ENST00000525459 PMS2P11Q13670 270 aa13.72□□□□□ -0.21
PTPRK-218ENST00000525459 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
PTPRK-218ENST00000525459 TXNDC17Q9BRA2 123 aa13.72□□□□□ -0.21
PTPRK-218ENST00000525459 TRBV7-9A0A0J9YWB2 115 aa13.71□□□□□ -0.21
PTPRK-218ENST00000525459 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.21
PTPRK-218ENST00000525459 ZNF705DP0CH99 300 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-218ENST00000525459 ZNF705BP0CI00 300 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-218ENST00000525459 TAGLN2P37802 199 aaKnown RBP13.71□□□□□ -0.21
PTPRK-218ENST00000525459 UBE2G2P60604 165 aa13.71□□□□□ -0.21
PTPRK-218ENST00000525459 YTHDF2Q9Y5A9 579 aaKnown RBP13.71□□□□□ -0.21
PTPRK-218ENST00000525459 A0A1B0GV50 99 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 HIST1H2BAQ96A08 127 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 IGKV2-40A0A087WW87 121 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-218ENST00000525459 F6UZH7 168 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 IGKV2D-40P01614 121 aaPredicted RBP13.7□□□□□ -0.22
PTPRK-218ENST00000525459 TCRAP04437 139 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 CYB561D1Q8N8Q1 229 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 ZNF680Q8NEM1 530 aa13.7□□□□□ -0.22
PTPRK-218ENST00000525459 EPDR1Q9UM22 224 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms