RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 GDF5OSQ5U4N7 250 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 SLC51BQ86UW2 128 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 BLNKQ8WV28 456 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 RCHY1Q96PM5 261 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
CCS-202ENST00000525435 H3BTX0 84 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 AMBPP02760 352 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
CCS-202ENST00000525435 DPPA3Q6W0C5 159 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 OR4B1Q8NGF8 309 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 RXFP4Q8TDU9 374 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 TMEM167BQ9NRX6 74 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 DNAH9Q9NYC9 4486 aa9.06□□□□□ -0.96
CCS-202ENST00000525435 F6UB75 175 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 HLA-DMBP28068 263 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 GCHFRP30047 84 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 CSN1S1P47710 185 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 RAB5CP51148 216 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 DEFB1P60022 68 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
CCS-202ENST00000525435 CD300CQ08708 224 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 ICAM4Q14773 271 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 FAM74A1Q5RGS3 127 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 C9orf62Q8N4C0 152 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
CCS-202ENST00000525435 COL7A1Q02388 2944 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
CCS-202ENST00000525435 HIST1H1AQ02539 215 aaPredicted RBP9.04□□□□□ -0.96
CCS-202ENST00000525435 DEFB135Q30KP9 77 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 AMTNQ6UX39 209 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 EXOC3-AS1Q8N2X6 119 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 LINC00477Q96M19 166 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 Q9H3A6 140 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 AGRNO00468 2067 aa9.04□□□□□ -0.96
CCS-202ENST00000525435 RBAKDNA6NC62 111 aa9.03□□□□□ -0.96
CCS-202ENST00000525435 HMGB3O15347 200 aaKnown RBP9.03□□□□□ -0.96
CCS-202ENST00000525435 TSPOP30536 169 aa9.03□□□□□ -0.96
CCS-202ENST00000525435 ZNF726P1Q15940 193 aa9.03□□□□□ -0.96
CCS-202ENST00000525435 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
CCS-202ENST00000525435 PHYHIPLQ96FC7 376 aa9.03□□□□□ -0.96
CCS-202ENST00000525435 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
CCS-202ENST00000525435 PPP1R14DQ9NXH3 145 aa9.03□□□□□ -0.96
CCS-202ENST00000525435 STAB2Q8WWQ8 2551 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 TRBV7-9A0A0J9YWB2 115 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 A0A1W2PRE2 83 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 PGPA6NDG6 321 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 ZNF705EA8MWA4 302 aaPredicted RBP9.02□□□□□ -0.97
CCS-202ENST00000525435 PRAC2D3DTV9 90 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 NPIPB6E9PJ23 425 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 M0R3E3 92 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 IGKV3-20P01619 116 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 SLC25A5P05141 298 aaKnown RBP9.02□□□□□ -0.97
CCS-202ENST00000525435 NMBP08949 121 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 C9orf47Q6ZRZ4 202 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 OR11H2Q8NH07 326 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 TMED6Q8WW62 240 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 RARRES2Q99969 163 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 XCL2Q9UBD3 114 aa9.02□□□□□ -0.97
CCS-202ENST00000525435 MAP1LC3B2A6NCE7 125 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 SMIM9A6NGZ8 99 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 BOLA2-SMG1P6H3BVE0 249 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 EIF3GO75821 320 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCS-202ENST00000525435 ZNF705DP0CH99 300 aaPredicted RBP9.01□□□□□ -0.97
CCS-202ENST00000525435 ZNF705BP0CI00 300 aaPredicted RBP9.01□□□□□ -0.97
CCS-202ENST00000525435 ZNF705AQ6ZN79 300 aaPredicted RBP9.01□□□□□ -0.97
CCS-202ENST00000525435 CMTM2Q8TAZ6 248 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 IGF2BP2-AS1Q96M15 143 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 WWC2-AS2Q96NR7 200 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 NEU1Q99519 415 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 MAP1LC3BQ9GZQ8 125 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 SLC35B3Q9H1N7 401 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 RETNQ9HD89 108 aa9.01□□□□□ -0.97
CCS-202ENST00000525435 TRAV1-1A0A0B4J248 108 aa9□□□□□ -0.97
CCS-202ENST00000525435 SERTM2A0A1B0GWG4 89 aa9□□□□□ -0.97
CCS-202ENST00000525435 DIRC3C9JPN6 131 aa9□□□□□ -0.97
CCS-202ENST00000525435 H2AFB1P0C5Y9 115 aa9□□□□□ -0.97
CCS-202ENST00000525435 MIFP14174 115 aa9□□□□□ -0.97
CCS-202ENST00000525435 CDKN1BP46527 198 aa9□□□□□ -0.97
CCS-202ENST00000525435 FHITP49789 147 aa9□□□□□ -0.97
CCS-202ENST00000525435 SSX7Q7RTT5 188 aa9□□□□□ -0.97
CCS-202ENST00000525435 SFT2D1Q8WV19 159 aa9□□□□□ -0.97
CCS-202ENST00000525435 C20orf144Q9BQM9 153 aa9□□□□□ -0.97
CCS-202ENST00000525435 AGPAT4-IT1Q9H0P7 198 aa9□□□□□ -0.97
CCS-202ENST00000525435 EDA2RQ9HAV5 297 aa9□□□□□ -0.97
CCS-202ENST00000525435 GOLT1BQ9Y3E0 138 aa9□□□□□ -0.97
CCS-202ENST00000525435 ARL2-SNX15V9GYD0 113 aa9□□□□□ -0.97
CCS-202ENST00000525435 HUWE1Q7Z6Z7 4374 aaKnown RBP8.99□□□□□ -0.97
CCS-202ENST00000525435 CT45A10P0DMU9 189 aa8.99□□□□□ -0.97
CCS-202ENST00000525435 LEPP41159 167 aa8.99□□□□□ -0.97
CCS-202ENST00000525435 SULT1A2P50226 295 aa8.99□□□□□ -0.97
CCS-202ENST00000525435 PPT1P50897 306 aa8.99□□□□□ -0.97
CCS-202ENST00000525435 TMEM78Q5T7P6 136 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms