RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ACTR3CQ9C0K3 210 aaPredicted RBP4.77□□□□□ -1.65
CD44-214ENST00000525211 HRH4Q9H3N8 390 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 TMEM231Q9H6L2 316 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 SRD5A3Q9H8P0 318 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 RETNQ9HD89 108 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 KCNIP2Q9NS61 270 aa4.77□□□□□ -1.65
CD44-214ENST00000525211 IGKV2-40A0A087WW87 121 aaPredicted RBP4.76□□□□□ -1.65
CD44-214ENST00000525211 TRAV2A0A0B4J234 112 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 CTXND1A0A1B0GTU2 59 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 A0A1W2PPV4 95 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 MAP1LC3B2A6NCE7 125 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 OR4C46A6NHA9 309 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 IGKV2D-40P01614 121 aaPredicted RBP4.76□□□□□ -1.65
CD44-214ENST00000525211 C4BPBP20851 252 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 ATP5G3P48201 142 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 UBE2G2P60604 165 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 RANP62826 216 aaKnown RBP4.76□□□□□ -1.65
CD44-214ENST00000525211 UBE2L3P68036 154 aaKnown RBP4.76□□□□□ -1.65
CD44-214ENST00000525211 ICAM4Q14773 271 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 PSG3Q16557 428 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 ACTL10Q5JWF8 245 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 AMTNQ6UX39 209 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 Q6ZQT7 251 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 SBSPONQ8IVN8 264 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 MRAPQ8TCY5 172 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 GPR61Q9BZJ8 451 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 MAP1LC3BQ9GZQ8 125 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 Q9H3A6 140 aa4.76□□□□□ -1.65
CD44-214ENST00000525211 A0A0J9YX75 114 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 PGPA6NDG6 321 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 H3BMM0 161 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 ISLRO14498 428 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 MBP02144 154 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 PRM2P04554 102 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 FRMD6-AS1P0C7T7 363 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 BMI1P35226 326 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 PSMB3P49720 205 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 ODF1Q14990 250 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 KHDC3LQ587J8 217 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 CT83Q5H943 113 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 DEFB121Q5J5C9 76 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 TEX261Q6UWH6 196 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 TRPT1Q86TN4 253 aaKnown RBP4.75□□□□□ -1.65
CD44-214ENST00000525211 IQCF2Q8IXL9 164 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 ZNF738Q8NE65 137 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 ZNF680Q8NEM1 530 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 SFT2D1Q8WV19 159 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 RPUSD4Q96CM3 377 aaKnown RBP4.75□□□□□ -1.65
CD44-214ENST00000525211 TVP23CQ96ET8 276 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 SGK494Q96LW2 274 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 LINC00479Q96M42 142 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 GPR82Q96P67 336 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 VGLL1Q99990 258 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 SLC35B3Q9H1N7 401 aa4.75□□□□□ -1.65
CD44-214ENST00000525211 TENM3Q9P273 2699 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 TRAV8-1A0A0A6YYK1 113 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 TRAV34A0A0B4J273 112 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 FAM74A7A6NL05 159 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 A8MTW9 85 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 ZNF705EA8MWA4 302 aaPredicted RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 PAGE4O60829 102 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 CXorf1O96002 111 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 RBMY1A1P0DJD3 496 aaKnown RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 RBMY1CP0DJD4 496 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 CNN1P51911 297 aaKnown RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 TAS2R45P59539 299 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 EIF5AP63241 154 aaKnown RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 PAFAH1B2P68402 229 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 RBMY1FQ15415 496 aaKnown RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 PRR9Q5T870 116 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 PQLC2Q6ZP29 291 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 GTSCR1Q86UQ5 136 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 CCDC28AQ8IWP9 274 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 OR8A1Q8NGG7 326 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 RARRES2Q99969 163 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 AGPAT4-IT1Q9H0P7 198 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 SAV1Q9H4B6 383 aaPredicted RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 CLEC5AQ9NY25 188 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 RPH3ALQ9UNE2 315 aa4.74□□□□□ -1.65
CD44-214ENST00000525211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.74□□□□□ -1.65
CD44-214ENST00000525211 A8MZ25 164 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 UMAD1C9J7I0 102 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 C9JQL5 133 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 M0R2Z0 102 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 CRXO43186 299 aaPredicted RBP4.73□□□□□ -1.65
CD44-214ENST00000525211 ZNF253O75346 499 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 IGLV2-11P01706 119 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 CD5P06127 495 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 NMBP08949 121 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 CT45A10P0DMU9 189 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 HLA-DRB4P13762 266 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 MEOX2P50222 304 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 HIST1H1AQ02539 215 aaPredicted RBP4.73□□□□□ -1.65
CD44-214ENST00000525211 HAGHQ16775 308 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 TOR2AQ5JU69 321 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 Q8N3U1 123 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 OR4B1Q8NGF8 309 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 LYPD6BQ8NI32 183 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms