RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FAM74A1Q5RGS3 127 aa9.17□□□□□ -0.94
VEGFA-225ENST00000523950 RARRES2Q99969 163 aa9.17□□□□□ -0.94
VEGFA-225ENST00000523950 PSMG3Q9BT73 122 aaPredicted RBP9.17□□□□□ -0.94
VEGFA-225ENST00000523950 SMDT1Q9H4I9 107 aa9.17□□□□□ -0.94
VEGFA-225ENST00000523950 FUT9Q9Y231 359 aa9.17□□□□□ -0.94
VEGFA-225ENST00000523950 ZNF705EA8MWA4 302 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-225ENST00000523950 H3BQ15 152 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 APOC3P02656 99 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 AMBPP02760 352 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 TAS2R45P59539 299 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 RHOBP62745 196 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 PSG9Q00887 426 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 MIR17HGQ75NE6 70 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 OR4B1Q8NGF8 309 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 OR2G3Q8NGZ4 309 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 LYPD6BQ8NI32 183 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 MRPL53Q96EL3 112 aaKnown RBP9.16□□□□□ -0.94
VEGFA-225ENST00000523950 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 SLC25A2Q9BXI2 301 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 NKX6-2Q9C056 277 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-225ENST00000523950 PRELID1Q9Y255 219 aa9.16□□□□□ -0.94
VEGFA-225ENST00000523950 TRBV19A0A075B6N1 114 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 F6UB75 175 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 DEFB1P60022 68 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 SERF2P84101 59 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 IGFL4Q6B9Z1 124 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 FAM122CQ6P4D5 195 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 OR51M1Q9H341 326 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 C11orf68Q9H3H3 251 aaKnown RBP9.15□□□□□ -0.94
VEGFA-225ENST00000523950 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.94
VEGFA-225ENST00000523950 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 SLC17A3O00476 420 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 SCO1O75880 301 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 MBP02144 154 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 MIFP14174 115 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 CNN1P51911 297 aaKnown RBP9.14□□□□□ -0.95
VEGFA-225ENST00000523950 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 CLRN3Q8NCR9 226 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 RPUSD4Q96CM3 377 aaKnown RBP9.14□□□□□ -0.95
VEGFA-225ENST00000523950 GNPNAT1Q96EK6 184 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-225ENST00000523950 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 AAMDCQ9H7C9 122 aa9.14□□□□□ -0.95
VEGFA-225ENST00000523950 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 NBEAP1P0C6P0 100 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 PYYP10082 97 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 ATP6V0CP27449 155 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 RPL7L1Q6DKI1 246 aaKnown RBP9.13□□□□□ -0.95
VEGFA-225ENST00000523950 AMTNQ6UX39 209 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 HSD17B11Q8NBQ5 300 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 NEU1Q99519 415 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 XCL2Q9UBD3 114 aa9.13□□□□□ -0.95
VEGFA-225ENST00000523950 DNAH7Q8WXX0 4024 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 STAB2Q8WWQ8 2551 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 F8W036 122 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 H3BTX0 84 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 OR7C2O60412 319 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 NDUFB4O95168 129 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 SNRPCP09234 159 aaKnown RBP9.12□□□□□ -0.95
VEGFA-225ENST00000523950 FLI1Q01543 452 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-225ENST00000523950 HIST1H1AQ02539 215 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-225ENST00000523950 PEA15Q15121 130 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 ZNF705AQ6ZN79 300 aaPredicted RBP9.12□□□□□ -0.95
VEGFA-225ENST00000523950 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 OR10G4Q8NGN3 311 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 OR10G9Q8NGN4 311 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 SLC35B3Q9H1N7 401 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 GOLT1BQ9Y3E0 138 aa9.12□□□□□ -0.95
VEGFA-225ENST00000523950 SMIM9A6NGZ8 99 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 RAB2AP61019 212 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
VEGFA-225ENST00000523950 Q8NAQ8 132 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 BLNKQ8WV28 456 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 ODF3Q96PU9 254 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 TREM1Q9NP99 234 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 PPP1R14DQ9NXH3 145 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 X6R8D5 127 aa9.11□□□□□ -0.95
VEGFA-225ENST00000523950 ZNF705FA8MVS1 300 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-225ENST00000523950 INSP01308 110 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 OR10J4P0C629 311 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 ZNF705DP0CH99 300 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-225ENST00000523950 ZNF705BP0CI00 300 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-225ENST00000523950 TSPOP30536 169 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 CDC34P49427 236 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms