RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 FAM210BQ96KR6 192 aa11.69□□□□□ -0.54
LSM1-205ENST00000523511 DKK2Q9UBU2 259 aa11.69□□□□□ -0.54
LSM1-205ENST00000523511 H3BTX0 84 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 TAS2R60P59551 318 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 FAM222AQ5U5X8 452 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 CCDC28AQ8IWP9 274 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 RPP25LQ8N5L8 163 aaKnown RBP11.68□□□□□ -0.54
LSM1-205ENST00000523511 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 OR51M1Q9H341 326 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 CELA1Q9UNI1 258 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 YTHDF2Q9Y5A9 579 aaKnown RBP11.68□□□□□ -0.54
LSM1-205ENST00000523511 ALG5Q9Y673 324 aa11.68□□□□□ -0.54
LSM1-205ENST00000523511 IGHV4-4A0A075B6R2 117 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 TRAV12-2A0A075B6T6 113 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 LYRM9A8MSI8 78 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 H7BYZ3 331 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 CRXO43186 299 aaPredicted RBP11.67□□□□□ -0.54
LSM1-205ENST00000523511 LEPP41159 167 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 TAS2R45P59539 299 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 DAD1P61803 113 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 BAP18Q8IXM2 172 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 APLNQ9ULZ1 77 aa11.67□□□□□ -0.54
LSM1-205ENST00000523511 AGRNO00468 2067 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 SLC17A3O00476 420 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 HTN1P15515 57 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 ZNF767PQ75MW2 155 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 PAXXQ9BUH6 204 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 PARD6GQ9BYG4 376 aaPredicted RBP11.66□□□□□ -0.54
LSM1-205ENST00000523511 FUT9Q9Y231 359 aa11.66□□□□□ -0.54
LSM1-205ENST00000523511 ZNF705GA8MUZ8 300 aaPredicted RBP11.65□□□□□ -0.54
LSM1-205ENST00000523511 CSN1S1P47710 185 aa11.65□□□□□ -0.54
LSM1-205ENST00000523511 GCSAMLQ5JQS6 135 aa11.65□□□□□ -0.54
LSM1-205ENST00000523511 FFAR4Q5NUL3 377 aa11.65□□□□□ -0.54
LSM1-205ENST00000523511 RNF141Q8WVD5 230 aa11.65□□□□□ -0.54
LSM1-205ENST00000523511 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
LSM1-205ENST00000523511 SMIM3Q9BZL3 60 aa11.65□□□□□ -0.54
LSM1-205ENST00000523511 DYNC2H1Q8NCM8 4307 aaKnown RBP11.65□□□□□ -0.54
LSM1-205ENST00000523511 OR7C2O60412 319 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 PYYP10082 97 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 ZNF266Q14584 549 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 ACOT6Q3I5F7 207 aaPredicted RBP11.64□□□□□ -0.55
LSM1-205ENST00000523511 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 LYSTQ99698 3801 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 SLC25A2Q9BXI2 301 aa11.64□□□□□ -0.55
LSM1-205ENST00000523511 TIMM8BQ9Y5J9 83 aaPredicted RBP11.64□□□□□ -0.55
LSM1-205ENST00000523511 RYR2Q92736 4967 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 A0A1W2PPV4 95 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 PRAC2D3DTV9 90 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 P0DMU3 169 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 FAM231AP0DMU4 169 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 FAM231CP0DMU5 169 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 RGS21Q2M5E4 152 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
LSM1-205ENST00000523511 INO80EQ8NBZ0 244 aaPredicted RBP11.63□□□□□ -0.55
LSM1-205ENST00000523511 SLC25A5P05141 298 aaKnown RBP11.62□□□□□ -0.55
LSM1-205ENST00000523511 HTN3P15516 51 aa11.62□□□□□ -0.55
LSM1-205ENST00000523511 ICAM4Q14773 271 aa11.62□□□□□ -0.55
LSM1-205ENST00000523511 FAM74A1Q5RGS3 127 aa11.62□□□□□ -0.55
LSM1-205ENST00000523511 FAM167A-AS1Q96KT0 104 aa11.62□□□□□ -0.55
LSM1-205ENST00000523511 NDUFB4O95168 129 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 NMBP08949 121 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 CT45A10P0DMU9 189 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 M6PRP20645 277 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 FCN2Q15485 313 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 RXFP4Q8TDU9 374 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 TMEM263Q8WUH6 116 aaKnown RBP11.61□□□□□ -0.55
LSM1-205ENST00000523511 PYGO2Q9BRQ0 406 aa11.61□□□□□ -0.55
LSM1-205ENST00000523511 SACSQ9NZJ4 4579 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 CBY3A6NI87 242 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 SNURFLB1AK76 121 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 M0R3E3 92 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 GIPP09681 153 aaPredicted RBP11.6□□□□□ -0.55
LSM1-205ENST00000523511 OR10J4P0C629 311 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 DEFB130BP0DP73 79 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 DEFB130AP0DP74 79 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 AZU1P20160 251 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 GFI1BQ5VTD9 330 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 FAM122CQ6P4D5 195 aa11.6□□□□□ -0.55
LSM1-205ENST00000523511 TRAV12-3A0A0B4J271 114 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 MBP02144 154 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 GPX1P07203 203 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
LSM1-205ENST00000523511 UBE2L3P68036 154 aaKnown RBP11.59□□□□□ -0.55
LSM1-205ENST00000523511 PQLC2Q6ZP29 291 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 C9orf47Q6ZRZ4 202 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 FXYD5Q96DB9 178 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
LSM1-205ENST00000523511 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms